RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 SP1P08047 785 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 NCS1P62166 190 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 GK3PQ14409 553 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 MEF2DQ14814 521 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 DPY19L2P1Q6NXN4 242 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 TMEM81Q6P7N7 255 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 KCNIP4Q6PIL6 250 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 ARIH2OSQ8N7S6 290 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OR51A2Q8NGJ7 313 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 RGCCQ9H4X1 137 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 ATG2BQ96BY7 2078 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 A0A087WV62 115 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OR5H14A6NHG9 310 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OR5H1A6NKK0 313 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 XKR7Q5GH72 579 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 TUSC5Q8IXB3 177 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 COL22A1Q8NFW1 1626 aaPredicted RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 KTI12Q96EK9 354 aaPredicted RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 LRRC3BQ96PB8 259 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 CCL19Q99731 98 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 LRFN3Q9BTN0 628 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 HSPE1-MOB4S4R3N1 261 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 LOC107986453A0A1B0GWG9 222 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 DVL1O14640 695 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 FZD6O60353 706 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 DVL1P1P54792 670 aaPredicted RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 MS4A2Q01362 244 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 MC2RQ01718 297 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 SAXO2Q658L1 398 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 ADAM5Q6NVV9 412 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 ZNF574Q6ZN55 896 aaPredicted RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 SFTPA2Q8IWL1 248 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 NOXO1Q8NFA2 376 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OR13G1Q8NGZ3 307 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 GHSRQ92847 366 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OR14A2Q96R54 314 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 RASL10BQ96S79 203 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 OSGIN1Q9UJX0 560 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 ING1Q9UK53 422 aaPredicted RBP6.43□□□□□ -1.38
RAG1-201ENST00000299440 LAMP3Q9UQV4 416 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 AMDHD2Q9Y303 409 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
RAG1-201ENST00000299440 PMP2P02689 132 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PATE4P0C8F1 98 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PRR35P0CG20 571 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PAX6P26367 422 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 SDHAP31040 664 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 TLE1Q04724 770 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PRDX4Q13162 271 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PROX2Q3B8N5 592 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 Q499Y3 187 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 Q56UQ5 140 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 GTPBP8Q8N3Z3 284 aaPredicted RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 DNAJC22Q8N4W6 341 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 OR4M1Q8NGD0 313 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 LRRC29Q8WV35 223 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 CNRIP1Q96F85 164 aaPredicted RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 CNTNAP3BQ96NU0 1288 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 SPTA1P02549 2419 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 DNAJC13O75165 2243 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 TMPRSS2O15393 492 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 SULT1B1O43704 296 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ATP6V1G1O75348 118 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 HOXC4P09017 264 aaPredicted RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 CSF3P09919 207 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 HIST1H1CP16403 213 aaKnown RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 SLC6A12P48065 614 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 LUMP51884 338 aaPredicted RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 RAP2BP61225 183 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ZNF117Q03924 483 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ZNF91Q05481 1191 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ZNF628Q5EBL2 1059 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 LHFPL2Q6ZUX7 228 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PRSS48Q7RTY5 328 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 CDC20BQ86Y33 519 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 D2HGDHQ8N465 521 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 OR2M7Q8NG81 312 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ZC3H10Q96K80 434 aaKnown RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 NMNAT2Q9BZQ4 307 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 GORASP2Q9H8Y8 452 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 MYH7P12883 1935 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 A8MXE2 369 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ARPC3O15145 178 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 ARNTP27540 789 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 HTD2P86397 168 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 OR8G2PQ6IF36 304 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PRSS42Q7Z5A4 293 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 DPPA2Q7Z7J5 298 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 CATSPERDQ86XM0 798 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 NUP37Q8NFH4 326 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 CORO2AQ92828 525 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 BSCL2Q96G97 398 aaPredicted RBP6.42□□□□□ -1.38
RAG1-201ENST00000299440 PKMYT1Q99640 499 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 NMES1Q9C002 83 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 MMP27Q9H306 513 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 UBQLN3Q9H347 655 aa6.42□□□□□ -1.38
RAG1-201ENST00000299440 PLEKHF2Q9H8W4 249 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms