RNA–Protein interactions for RNA: ENST00000291074.9

VPS53-201, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-201ENST00000291074 ARPC5LQ9BPX5 153 aa17.85■□□□□ 0.45
VPS53-201ENST00000291074 LHFPL6Q9Y693 200 aa17.85■□□□□ 0.45
VPS53-201ENST00000291074 MASP2O00187 686 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 AKAIN1P0CW23 69 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 FGF5P12034 268 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 TEX261Q6UWH6 196 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 FTMTQ8N4E7 242 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 CLEC1AQ8NC01 280 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 NKD1Q969G9 470 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 ADAT3Q96EY9 351 aaPredicted RBP17.84■□□□□ 0.45
VPS53-201ENST00000291074 DPCDQ9BVM2 203 aaPredicted RBP17.84■□□□□ 0.45
VPS53-201ENST00000291074 TAS2R8Q9NYW2 309 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
VPS53-201ENST00000291074 U3KQ87 197 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 FREM2Q5SZK8 3169 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 ANOS1P23352 680 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 GNALP38405 381 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 SEH1LQ96EE3 360 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 PBOV1Q9GZY1 135 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 C1orf198Q9H425 327 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 GDF2Q9UK05 429 aaPredicted RBP17.84■□□□□ 0.45
VPS53-201ENST00000291074 POLR1DQ9Y2S0 133 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 RHBDD3Q9Y3P4 386 aa17.84■□□□□ 0.45
VPS53-201ENST00000291074 D6RAR5 112 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 UMODP07911 640 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 CD37P11049 281 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 MECP2P51608 486 aaKnown RBP17.83■□□□□ 0.44
VPS53-201ENST00000291074 PSMA6P60900 246 aaKnown RBP17.83■□□□□ 0.44
VPS53-201ENST00000291074 KLHL24Q6TFL4 600 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 SLC36A1Q7Z2H8 476 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 ZNF680Q8NEM1 530 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 MR1Q95460 341 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 GPN1Q9HCN4 374 aaPredicted RBP17.83■□□□□ 0.44
VPS53-201ENST00000291074 PTRH2Q9Y3E5 179 aaKnown RBP17.83■□□□□ 0.44
VPS53-201ENST00000291074 RTTNQ86VV8 2226 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 ZDBF2Q9HCK1 2354 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 G3V3Y1 287 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 LDLRAD4O15165 306 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 MPC2O95563 127 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 IGHG1P01857 330 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 IL5P05113 134 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 SLC2A1P11166 492 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 THEM4Q5T1C6 240 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 STEAP1BQ6NZ63 245 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 LYPD6Q86Y78 171 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 UBALD2Q8IYN6 164 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 FADS6Q8N9I5 356 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 ACBD4Q8NC06 268 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 OR52N4Q8NGI2 321 aa17.83■□□□□ 0.44
VPS53-201ENST00000291074 ARPC4-TTLL3A0A0A6YYG9 625 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 MEGF11A6BM72 1044 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 SYT7O43581 403 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 GABRA1P14867 456 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 CPN1P15169 458 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 TSPAN5P62079 268 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 C2orf68Q2NKX9 166 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 GABRG1Q8N1C3 465 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 OR1J2Q8NGS2 313 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 MED30Q96HR3 178 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 SOX7Q9BT81 388 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 CHST6Q9GZX3 395 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 PTGES2Q9H7Z7 377 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 CNTD2Q9H8S5 307 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 GPN3Q9UHW5 284 aaPredicted RBP17.82■□□□□ 0.44
VPS53-201ENST00000291074 NCOA6Q14686 2063 aaPredicted RBP17.82■□□□□ 0.44
VPS53-201ENST00000291074 M0QYG6 137 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 SIX6O95475 246 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 PRKXP51817 358 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 OC90Q02509 493 aaPredicted RBP17.82■□□□□ 0.44
VPS53-201ENST00000291074 PMPCAQ10713 525 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 ELMOD2Q8IZ81 293 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 SPICQ8N5J4 248 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 OR6N1Q8NGY5 312 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 B3GNT4Q9C0J1 378 aa17.82■□□□□ 0.44
VPS53-201ENST00000291074 CCDC163A0A0D9SF12 145 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 LOC390937A0A1W2PQ73 354 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 TMEM235A6NFC5 223 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 C1orf100Q5SVJ3 147 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 FAM198BQ6UWH4 519 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 RNF144BQ7Z419 303 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 GALNT16Q8N428 558 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 UXS1Q8NBZ7 420 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 PCNPQ8WW12 178 aaKnown RBP17.81■□□□□ 0.44
VPS53-201ENST00000291074 FAM46BQ96A09 425 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 SORCS2Q96PQ0 1159 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 ASH2LQ9UBL3 628 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 IGHV1-45A0A0A0MS14 117 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 WIPF3A6NGB9 483 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 SNRPGP15A8MWD9 76 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 TDGF1P13385 188 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 TOMM20Q15388 145 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 ZNF813Q6ZN06 617 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 WDR5BQ86VZ2 330 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 OR51E1Q8TCB6 317 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 CMBLQ96DG6 245 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 TINAGL1Q9GZM7 467 aaPredicted RBP17.81■□□□□ 0.44
VPS53-201ENST00000291074 WDR54Q9H977 334 aa17.81■□□□□ 0.44
VPS53-201ENST00000291074 LPLP06858 475 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 ZNF43P17038 809 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 BDKRB2P30411 391 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms