RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CST9Q5W186 159 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 OR6K3Q8NGY3 331 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 CSF2RBP32927 897 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 MMP15P51511 669 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 ADPRHP54922 357 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 YPEL5P62699 121 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 OR13C8Q8NGS7 320 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 ARV1Q9H2C2 271 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 MED29Q9NX70 200 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 PRELID3BQ9Y3B1 194 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 MN1Q10571 1320 aaPredicted RBP13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 IDSB3KWA1 339 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 GRPP07492 148 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 RPL12P30050 165 aaKnown RBP13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 NKX2-1P43699 371 aaPredicted RBP13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 LBX1P52954 281 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 RPUSD3Q6P087 351 aaKnown RBP13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 MISPQ8IVT2 679 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 SEMA6DQ8NFY4 1073 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 TPPP3Q9BW30 176 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 SSC5DA1L4H1 1573 aa13.94□□□□□ -0.18
SHROOM4-201ENST00000289292 ABHD16AO95870 558 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PRPH2P23942 346 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 DCDP81605 110 aaKnown RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 LYSMD4Q5XG99 296 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 OR4N2Q8NGD1 307 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 EMG1Q92979 244 aaKnown RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 ENSAO43768 121 aaKnown RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 SEMG1P04279 462 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 QDPRP09417 244 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 C1QTNF12Q5T7M4 302 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 V9GYS6 101 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 DFFBO76075 338 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 NXPH2O95156 264 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 ASCL1P50553 236 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 GRB2P62993 217 aaKnown RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 RUNX2Q13950 521 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 VWA2Q5GFL6 755 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 ZNF75AQ96N20 296 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 LYSMD1Q96S90 227 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 KCNJ15Q99712 375 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 MT-ATP6P00846 226 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 IAPPP10997 89 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 MGMTP16455 207 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 CATR1Q13166 79 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 SYT13Q7L8C5 426 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 LYG2Q86SG7 212 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 SLC43A2Q8N370 569 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 SAT2Q96F10 170 aaPredicted RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 GNG12Q9UBI6 72 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PLSCR5A0PG75 271 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 HLA-HP01893 362 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 AVPR2P30518 371 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PCBP3P57721 371 aaKnown RBP13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 CLLU1Q5K131 121 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 ZNF813Q6ZN06 617 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 GRINAQ7Z429 371 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 AMER3Q8N944 861 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 PPP1R35Q8TAP8 253 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 TSLPQ969D9 159 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 GPR84Q9NQS5 396 aa13.93□□□□□ -0.18
SHROOM4-201ENST00000289292 BCL2L11O43521 198 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 FABP1P07148 127 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 EDDM3AQ14507 147 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 MAGT1Q9H0U3 335 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 TRAPPC4Q9Y296 219 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 FLVCR1Q9Y5Y0 555 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 XRCC2O43543 280 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 GOT1L1Q8NHS2 421 aaPredicted RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 RXFP4Q8TDU9 374 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SIPA1L3O60292 1781 aaPredicted RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 ZNF587BE7ETH6 402 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SFTA3P0C7M3 94 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 RRASP10301 218 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 PARM1Q6UWI2 310 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 DOK3Q7L591 496 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 LRRTM1Q86UE6 522 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SLC22A11Q9NSA0 550 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 POMT2Q9UKY4 750 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 A0A0A6YYD5 115 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SNRPGP15A8MWD9 76 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 NRG2O14511 850 aaPredicted RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SRPXP78539 464 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 TAF9Q16594 264 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 FAM199XQ6PEV8 388 aaPredicted RBP13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 KIRREL2Q6UWL6 708 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 JAM3Q9BX67 310 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 FOXJ3Q9UPW0 622 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 OR5K3A6NET4 321 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 OR8U8P0C7N1 319 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms