RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ADAM19Q9H013 955 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 CALHM2Q9HA72 323 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 BOKQ9UMX3 212 aaPredicted RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 SLC22A13Q9Y226 551 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 MMACHCQ9Y4U1 282 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 UPK1AO00322 258 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 EFSO43281 561 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF354AO60765 605 aaPredicted RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 H2AFB1P0C5Y9 115 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 OR4E1P0C645 316 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 ELLP55199 621 aaPredicted RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 GALNT16Q8N428 558 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 PTP4A1Q93096 173 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 RNASEK-C17orf49H0YIS7 233 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 CD37P11049 281 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 POU3F3P20264 500 aaPredicted RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 DOC2BQ14184 412 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 PYCR3Q53H96 274 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 STAC2Q6ZMT1 411 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 TOX2Q96NM4 488 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 KIAA0100Q14667 2235 aaKnown RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 CD1CP29017 333 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 DCDP81605 110 aaKnown RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 BHLHE23Q8NDY6 225 aa14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 ZC3HAV1LQ96H79 300 aaKnown RBP14.99□□□□□ -0.01
SH3RF1-201ENST00000284637 PRSS23O95084 383 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 HLA-DOBP13765 273 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 CXCL12P48061 93 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 SSX1Q16384 188 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 C9orf152Q5JTZ5 239 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 FBXO46Q6PJ61 603 aaPredicted RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 LANCL3Q6ZV70 420 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 LINC00518Q8N0U6 118 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 KCNJ15Q99712 375 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 DUSP23Q9BVJ7 150 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 ELF5Q9UKW6 265 aaPredicted RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 F5P12259 2224 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 NFYBP25208 207 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 NKX2-1P43699 371 aaPredicted RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 SSR4P51571 173 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF133P52736 654 aaPredicted RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 HSD17B7P56937 341 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 CARD18P57730 90 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 SPICQ8N5J4 248 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 PPP1R1CQ8WVI7 109 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF2Q9BSG1 426 aaPredicted RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 PISDQ9UG56 409 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 TRBV5-4A0A0C4DH59 114 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 MGST1P10620 155 aaKnown RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 SLC6A1P30531 599 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 RPL18Q07020 188 aaKnown RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 GSG1Q2KHT4 349 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 LINC00303Q3SY05 128 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 LRRTM1Q86UE6 522 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 CALHM3Q86XJ0 350 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 BCORP1Q8N888 145 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 ANKRD10Q9NXR5 420 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 STRAPQ9Y3F4 350 aaKnown RBP14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 TCAPO15273 167 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 GUSBP08236 651 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 ABOP16442 354 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 PJVKQ0ZLH3 352 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 HAGHQ16775 308 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 DBX2Q6ZNG2 339 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 SMIM15Q7Z3B0 74 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 OR2W3Q7Z3T1 314 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 BCO1Q9HAY6 547 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 GPR173Q9NS66 373 aa14.98□□□□□ -0.01
SH3RF1-201ENST00000284637 PRRT4C9JH25 899 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 BCAT2O15382 392 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 CYB5BO43169 146 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 NXPH2O95156 264 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 SFTA3P0C7M3 94 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 EPXP11678 715 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 ECI1P42126 302 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 AKR1C3P42330 323 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PCBP4P57723 403 aaKnown RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 MANEAQ5SRI9 462 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 OR6K3Q8NGY3 331 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 NAT6Q93015 286 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 MARVELD3Q96A59 401 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 KIRREL1Q96J84 757 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PADI1Q9ULC6 663 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 OSGIN2Q9Y236 505 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 TLCD2A6NGC4 264 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 HLA-HP01893 362 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PRR35P0CG20 571 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 RFC3P40938 356 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PSMB3P49720 205 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 GRB2P62993 217 aaKnown RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF273Q14593 569 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 VHLLQ6RSH7 139 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 ZNF574Q6ZN55 896 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 ARIH2OSQ8N7S6 290 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 C15orf54Q8N8G6 183 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 OR4A16Q8NH70 328 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 BSCL2Q96G97 398 aaPredicted RBP14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 PLAC1Q9HBJ0 212 aa14.97□□□□□ -0.01
SH3RF1-201ENST00000284637 C20orf202A1L168 122 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms