RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 GRPP07492 148 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 WIPI1Q5MNZ9 446 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 COL13A1Q5TAT6 717 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 OR52I2Q8NH67 350 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 YIPF6Q96EC8 236 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 ZNF764Q96H86 408 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 TRIB1Q96RU8 372 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 ZNF436Q9C0F3 470 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 SCPEP1Q9HB40 452 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 NPAP1Q9NZP6 1156 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 FBXL4Q9UKA2 621 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 PARP14Q460N5 1801 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 A0A0D9SG52 128 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 A0A1W2PS29 197 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 ZNF14P17017 642 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 PCK2Q16822 640 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 PAN3Q58A45 887 aaKnown RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 RFPL4BQ6ZWI9 263 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 UBE3DQ7Z6J8 389 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 ANKRD37Q7Z713 158 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 OR51S1Q8NGJ8 323 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 R4GMQ9 66 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 PMP2P02689 132 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 CCL4P13236 92 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 DSCR4P56555 118 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 TRIP6Q15654 476 aaKnown RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 OR11G2Q8NGC1 345 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 OR4Q3Q8NH05 313 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 C20orf85Q9H1P6 137 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
TIMP3-201ENST00000266085 KCNJ16Q9NPI9 418 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 KIF25Q9UIL4 384 aa13.93□□□□□ -0.18
TIMP3-201ENST00000266085 IMPA2O14732 288 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 ARPC3O15145 178 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 PMS2P2O95744 297 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 UBE2IP63279 158 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 DMWDQ09019 674 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 ACER2Q5QJU3 275 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 INTS12Q96CB8 462 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 C20orf141Q9NUB4 165 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 PMS2P1A4D2B8 440 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 MSL3P1P0C860 447 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 SRP9P49458 86 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 MRM1Q6IN84 353 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 KIRREL1Q96J84 757 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 SPACA5Q96QH8 159 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 TOX3O15405 576 aaPredicted RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 FBXO24O75426 580 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 FCARP24071 287 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 EVX1P49640 407 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 EDDM3BP56851 147 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 CBLN3Q6UW01 205 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 OR2V1Q8NHB1 315 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 EMG1Q92979 244 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 UPRTQ96BW1 309 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 CNTNAP3BQ96NU0 1288 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 JAM3Q9BX67 310 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 DNAJB12Q9NXW2 375 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 KIR2DS1A0A191URI9 304 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 FIGNL2A6NMB9 653 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 ALG1L2C9J202 215 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 APEHP13798 732 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 KIR2DS4P43632 304 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 NPY4RP50391 375 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 ARF1P84077 181 aaKnown RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 KIR2DS1Q14954 304 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 OR1C1Q15619 314 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
TIMP3-201ENST00000266085 ALKBH3Q96Q83 286 aaPredicted RBP13.92□□□□□ -0.18
TIMP3-201ENST00000266085 MSTNO14793 375 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 TNFSF14O43557 240 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 PTGER4P35408 488 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 ARR3P36575 388 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 F2RL1P55085 397 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 MYBPHQ13203 477 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 ASAH1Q13510 395 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 HES3Q5TGS1 186 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OR5AS1Q8N127 324 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 NMNAT2Q9BZQ4 307 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 SLCO1C1Q9NYB5 712 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 GDF2Q9UK05 429 aaPredicted RBP13.91□□□□□ -0.18
TIMP3-201ENST00000266085 TMEM235A6NFC5 223 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 BTG1P62324 171 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 CDK5Q00535 292 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 POU4F3Q15319 338 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 STAC2Q6ZMT1 411 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 BATF2Q8N1L9 274 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OR4D6Q8NGJ1 314 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OR51F2Q8NH61 342 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OCIAD1Q9NX40 245 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 WISP3O95389 354 aaPredicted RBP13.91□□□□□ -0.18
TIMP3-201ENST00000266085 FUCA1P04066 466 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 ECI1P42126 302 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 OR10A3P58181 314 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 DGCR2P98153 550 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 AQP6Q13520 282 aa13.91□□□□□ -0.18
TIMP3-201ENST00000266085 EBPQ15125 230 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms