RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 BHLHE23Q8NDY6 225 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 OR10AD1Q8NGE0 317 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 OR52E2Q8NGJ4 325 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 OR52J3Q8NH60 311 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 SLC7A6Q92536 515 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 APOBEC3DQ96AK3 386 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-202ENST00000262396 CMTM5Q96DZ9 223 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 ERMAPQ96PL5 475 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-202ENST00000262396 DUX5Q96PT3 197 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 PITX2Q99697 317 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 POFUT1Q9H488 388 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 TMEM100Q9NV29 134 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
TRAF4-202ENST00000262396 SAMD4AQ9UPU9 718 aaKnown RBP10.33□□□□□ -0.76
TRAF4-202ENST00000262396 V9GYQ6 96 aa10.33□□□□□ -0.76
TRAF4-202ENST00000262396 IGHV3-64DA0A0J9YX35 117 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 J3QW42 95 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 RER1O15258 196 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SASH3O75995 380 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF205O95201 554 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 RHCEP18577 417 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SLC6A6P31641 620 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 IFNGR2P38484 337 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SLC6A9P48067 706 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 HLXQ14774 488 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 AWAT1Q58HT5 328 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SPRNQ5BIV9 151 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 TMEM255AQ5JRV8 349 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 GLYATQ6IB77 296 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 LEG1Q6P5S2 330 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SMARCD3Q6STE5 483 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 OR8G5Q8NG78 346 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 OR8B3Q8NGG8 313 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF420Q8TAQ5 688 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 FANK1Q8TC84 345 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SLC7A13Q8TCU3 470 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SPRYD4Q8WW59 207 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SLC25A28Q96A46 364 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 OR8B2Q96RD0 313 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 IFT27Q9BW83 186 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 NUAK2Q9H093 628 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 HDHD2Q9H0R4 259 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 ZMAT3Q9HA38 289 aaKnown RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 SRA1Q9HD15 236 aaKnown RBP10.32□□□□□ -0.76
TRAF4-202ENST00000262396 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 KIF17Q9P2E2 1029 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 MIOXQ9UGB7 285 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 OPN4Q9UHM6 478 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 TMCC3Q9ULS5 477 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 LRCH1Q9Y2L9 728 aa10.32□□□□□ -0.76
TRAF4-202ENST00000262396 IGHV3OR16-10A0A075B7F0 116 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 F5H5K5 113 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 TMEM178BH3BS89 294 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 NME4O00746 187 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 PPP1R3DO95685 299 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 CYB5R3P00387 301 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-202ENST00000262396 LCATP04180 440 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 DBHP09172 617 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 FPR3P25089 353 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 MMP16P51512 607 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 PSME3P61289 254 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 SPIBQ01892 262 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 DGCR6Q14129 220 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 CGB2Q6NT52 195 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 LRRN1Q6UXK5 716 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 Q6ZR03 302 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 MOGAT3Q86VF5 341 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 ZDHHC22Q8N966 263 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 FAM156AQ8NDB6 213 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 NEIL1Q96FI4 390 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-202ENST00000262396 MEGF10Q96KG7 1140 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 COQ7Q99807 217 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 WDR76Q9H967 626 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 NRIP3Q9NQ35 241 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 VSX1Q9NZR4 365 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF69Q9UC07 566 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 ATPIF1Q9UII2 106 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 SIGLEC7Q9Y286 467 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 PCDHGB1Q9Y5G3 927 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 INSIG2Q9Y5U4 225 aa10.31□□□□□ -0.76
TRAF4-202ENST00000262396 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 TRAPPC2LH3BP13 241 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 OR10H3O60404 316 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 DIRAS1O95057 198 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 GADD45GO95257 159 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 GPANK1O95872 356 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 CRYBA1P05813 215 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF823P16415 610 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF12P17014 697 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 FUT4P22083 530 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 PRTN3P24158 256 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 SEC61A1P61619 476 aaKnown RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 HNRNPA0Q13151 305 aaKnown RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 MEP1BQ16820 701 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms