RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 OR11A1Q9GZK7 315 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 EXO5Q9H790 373 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 ELOVL3Q9HB03 270 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 SLC22A11Q9NSA0 550 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 FGF21Q9NSA1 209 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 MRPL22Q9NWU5 206 aaKnown RBP20.25■□□□□ 0.83
MCF2L-201ENST00000261963 MBD2Q9UBB5 411 aa20.25■□□□□ 0.83
MCF2L-201ENST00000261963 IGLV1-36A0A0B4J1U3 117 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 TRAV20A0A0B4J274 112 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 OR6C76A6NM76 312 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 PHYHO14832 338 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 GLB1P16278 677 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 ADCYAP1P18509 176 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 SNTB1Q13884 538 aaKnown RBP20.24■□□□□ 0.83
MCF2L-201ENST00000261963 C1orf140Q5VVS0 124 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 BEST3Q8N1M1 668 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 DMBX1Q8NFW5 382 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 DUSP19Q8WTR2 217 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 MCHR2Q969V1 340 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 ARID1BQ8NFD5 2236 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-201ENST00000261963 IGHV3-20A0A0C4DH32 117 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 HSPB2A8KAH6 182 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 OR2F2O95006 317 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 BDKRB2P30411 391 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 AKR1C2P52895 323 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 AKR1C1Q04828 323 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 RASGEF1BQ0VAM2 473 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 OR2F1Q13607 317 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF345Q14585 488 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 HSPB2Q16082 182 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 MEP1BQ16820 701 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 C16orf47Q6ZP98 133 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-201ENST00000261963 COX15Q7KZN9 410 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 OR51S1Q8NGJ8 323 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF417Q8TAU3 575 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 MESP1Q9BRJ9 268 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 TXNIPQ9H3M7 391 aa20.24■□□□□ 0.83
MCF2L-201ENST00000261963 VSX1Q9NZR4 365 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-201ENST00000261963 MYEF2Q9P2K5 600 aaKnown RBP20.24■□□□□ 0.83
MCF2L-201ENST00000261963 A8MVM7 634 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 SGCEO43556 437 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 HLA-DQA2P01906 255 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ANXA2P07355 339 aaKnown RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 CTLA4P16410 223 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 SLC17A1Q14916 467 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 FDX2Q6P4F2 183 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 GRINAQ7Z429 371 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 NUDT22Q9BRQ3 303 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 CHST6Q9GZX3 395 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 UBE2ZQ9H832 354 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ASF1BQ9NVP2 202 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF629Q9UEG4 869 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 SLC16A7O60669 478 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 CRYBA1P05813 215 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ACAA1P09110 424 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 SMAD2Q15796 467 aaKnown RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 LY6G6FQ5SQ64 297 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 GLT8D1Q68CQ7 371 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 PLPP5Q8NEB5 264 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 VRK1Q99986 396 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ZFP57Q9NU63 452 aa20.23■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF230Q9UIE0 474 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-201ENST00000261963 SULT1C2O00338 296 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 PLPP3O14495 311 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 BLOC1S1P78537 153 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF600Q6ZNG1 722 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 TNFSF18Q9UNG2 199 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 PNPP00491 289 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 AKAIN1P0CW23 69 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 CENPAP49450 140 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 ZFP82Q8N141 532 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 OR6S1Q8NH40 331 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 CCDC107Q8WV48 283 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 C8orf44Q96CB5 159 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF587Q96SQ5 575 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-201ENST00000261963 CRB3Q9BUF7 120 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 ALX4Q9H161 411 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-201ENST00000261963 SLC22A13Q9Y226 551 aa20.22■□□□□ 0.83
MCF2L-201ENST00000261963 MRPS17Q9Y2R5 130 aaKnown RBP20.22■□□□□ 0.83
MCF2L-201ENST00000261963 OR5H14A6NHG9 310 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 XRCC3O43542 346 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF354AO60765 605 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-201ENST00000261963 SNAPINO95295 136 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 CD8AP01732 235 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 GTF2F2P13984 249 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 ASPHD2Q6ICH7 369 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 STEAP1Q9UHE8 339 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 RAD1O60671 282 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 PMS2P2O95744 297 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 WNT11O96014 354 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 IGHMP01871 453 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 IL11P20809 199 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 RNF4P78317 190 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 RAB12Q6IQ22 244 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 ZNF679Q8IYX0 411 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 RNF128Q8TEB7 428 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 DNASE2BQ8WZ79 361 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 WNT2BQ93097 391 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 PPP1R14AQ96A00 147 aa20.21■□□□□ 0.83
MCF2L-201ENST00000261963 CARHSP1Q9Y2V2 147 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms