RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LAIR1Q6GTX8 287 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 SLC35A2P78381 396 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 OR10X1Q8NGY0 326 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 EGLN1Q9GZT9 426 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 LAT2Q9GZY6 243 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF195O14628 629 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 ACHEP22303 614 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 LAP3P28838 519 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 TMEM104Q8NE00 496 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 TOGARAM1Q9Y4F4 1720 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 CCR9P51686 369 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 FAM109AQ8N4B1 249 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 NARFLQ9H6Q4 476 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 PLEKHF2Q9H8W4 249 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 SMIM18P0DKX4 95 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 PDCD1Q15116 288 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 FCRL6Q6DN72 434 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 UBALD1Q8TB05 177 aa16.97■□□□□ 0.31
SMARCC1-201ENST00000254480 NME2P1O60361 137 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 CLN3Q13286 438 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 SMIM15Q7Z3B0 74 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 THNSL2Q86YJ6 484 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 PXT1Q8NFP0 134 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 GON7Q9BXV9 100 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 RIMS4Q9H426 269 aaPredicted RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 TMEM9BQ9NQ34 198 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 NRASP01111 189 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 SBK3P0C264 359 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 ARL16Q0P5N6 197 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 SPANXN5Q5MJ07 72 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 CMTM2Q8TAZ6 248 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 TRMT61AQ96FX7 289 aaKnown RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 BOD1Q96IK1 185 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 ITGB4P16144 1822 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 SPRY1O43609 319 aaPredicted RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 CNR1P21554 472 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 SDHBP21912 280 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 IL10RAQ13651 578 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 KIRREL2Q6UWL6 708 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 RBMS3Q6XE24 437 aaKnown RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 LGI3Q8N145 548 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 OR2G3Q8NGZ4 309 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 FYTTD1Q96QD9 318 aaKnown RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 NDRG4Q9ULP0 352 aaKnown RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 KLF13Q9Y2Y9 288 aaPredicted RBP16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 IL3RAP26951 378 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 FAM27D1Q5T7N8 215 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 CATSPERDQ86XM0 798 aa16.96■□□□□ 0.31
SMARCC1-201ENST00000254480 CACNA1CQ13936 2221 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 XRCC3O43542 346 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 RGS11O94810 467 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 IAPPP10997 89 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 MAGEB1P43366 347 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 CCR5P51681 352 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 FABP5Q01469 135 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 TLE1Q04724 770 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 ZNF626Q68DY1 528 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 LILRB4Q8NHJ6 448 aa16.96■□□□□ 0.3
SMARCC1-201ENST00000254480 PRSS37A4D1T9 235 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 CRYM-AS1A6NIL9 109 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 H0YIG0 161 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 HPNP05981 417 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 S100A11P31949 105 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 HAAOP46952 286 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 SLCO1C1Q9NYB5 712 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 FZR1Q9UM11 496 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 PCYT1BQ9Y5K3 369 aaPredicted RBP16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 CSAG2Q9Y5P2 127 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 PMS2P2O95744 297 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 GPANK1O95872 356 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 HYAL1Q12794 435 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 SELENBP1Q13228 472 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 PRSS35Q8N3Z0 413 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 SOHLH1Q5JUK2 328 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 MORN4Q8NDC4 146 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 THEM4Q5T1C6 240 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 GUSBP11Q6P575 273 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 NLRP8Q86W28 1048 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 EXOSC3Q9NQT5 275 aaKnown RBP16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 SSSCA1O60232 199 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 CTGFP29279 349 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 NDUFA6P56556 154 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 PTOV1Q86YD1 416 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 TVP23CQ96ET8 276 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 ZCCHC4Q9H5U6 513 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 ESRP2Q9H6T0 727 aaKnown RBP16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 SIAEQ9HAT2 523 aa16.95■□□□□ 0.3
SMARCC1-201ENST00000254480 FUCA1P04066 466 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TMUB2Q71RG4 321 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 ZNF75AQ96N20 296 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 PBOV1Q9GZY1 135 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TAF9BQ9HBM6 251 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 FLVCR1Q9Y5Y0 555 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms