RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF701Q9NV72 531 aaPredicted RBP10.76□□□□□ -0.69
USHBP1-201ENST00000252597 CYB5R1Q9UHQ9 305 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 TMEM150CB9EJG8 249 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 GIMD1P0DJR0 217 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 SMIM10L1P0DMW3 83 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 PNMTP11086 282 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 ELOCQ15369 112 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 LY6G6FQ5SQ64 297 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 HSD17B13Q7Z5P4 300 aaPredicted RBP10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OR52N4Q8NGI2 321 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OR6K3Q8NGY3 331 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 ADAMTS18Q8TE60 1221 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 PHF3Q92576 2039 aaKnown RBP10.76□□□□□ -0.69
USHBP1-201ENST00000252597 SMIM10Q96HG1 83 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 FOXQ1Q9C009 403 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 GLS2Q9UI32 602 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 TMEM184BQ9Y519 407 aaPredicted RBP10.76□□□□□ -0.69
USHBP1-201ENST00000252597 SLCO1B1Q9Y6L6 691 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 ABCA7Q8IZY2 2146 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 NPIPA5E9PKD4 350 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 K7EQS6 105 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 M0R036 132 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 SYT7O43581 403 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 AHSA1O95433 338 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 LDOC1O95751 146 aaPredicted RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 MPGP29372 298 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 CSF2RBP32927 897 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 CASRP41180 1078 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PDZK1IP1Q13113 114 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PAN3Q58A45 887 aaKnown RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 CDCP2Q5VXM1 449 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 KLHL24Q6TFL4 600 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 SLC29A4Q7RTT9 530 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 CDC20BQ86Y33 519 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 STOML3Q8TAV4 291 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 LMX1AQ8TE12 382 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PHYHIPQ92561 330 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF775Q96BV0 537 aaPredicted RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 MRGPRX1Q96LB2 322 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PELOQ9BRX2 385 aaKnown RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 TLNRD1Q9H1K6 362 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 NPIPA1Q9UND3 350 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 CCDC163A0A0D9SF12 145 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 A0A0D9SG52 128 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF254O75437 659 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 DAOP14920 347 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PPT1P50897 306 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 PPIAP62937 165 aaKnown RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 SLC16A13Q7RTY0 426 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF679Q8IYX0 411 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 C19orf47Q8N9M1 422 aaKnown RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 OR4K17Q8NGC6 315 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ASB5Q8WWX0 329 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 WBP1Q96G27 269 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 OR8B4Q96RC9 309 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 GDE1Q9NZC3 331 aa10.75□□□□□ -0.69
USHBP1-201ENST00000252597 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF878C9JN71 531 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 OR2T1O43869 369 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CD80P33681 288 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 EMP2P54851 167 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF117Q03924 483 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CCINQ13939 588 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 DEFB133Q30KQ1 61 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 MAMDC2Q7Z304 686 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 RNF144BQ7Z419 303 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 NANPQ8TBE9 248 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 MESP1Q9BRJ9 268 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF426Q9BUY5 554 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 RASL12Q9NYN1 266 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 FREM2Q5SZK8 3169 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 DMDP11532 3685 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF98A6NK75 572 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 C5orf67F2Z3F1 127 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ABOP16442 354 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF20P17024 532 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 SLC6A9P48067 706 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 NPBWR1P48145 328 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 GLO1Q04760 184 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 GGTLC2Q14390 218 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF704Q6ZNC4 412 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ACOT7LQ6ZUV0 252 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ABHD12BQ7Z5M8 362 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 LDLRAD3Q86YD5 345 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 LINC00518Q8N0U6 118 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 SVBPQ8N300 66 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 OR4K15Q8NH41 348 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CTHRC1Q96CG8 243 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 LMF2Q9BU23 707 aaKnown RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 NKX2-4Q9H2Z4 354 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ZCCHC4Q9H5U6 513 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CNTD2Q9H8S5 307 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 SFXN1Q9H9B4 322 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms