RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SPI1P17947 270 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ACHEP22303 614 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 MPV17P39210 176 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ERFP50548 548 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 MMP15P51511 669 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 OTPQ5XKR4 325 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 FAHD1Q6P587 224 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 TMEM154Q6P9G4 183 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.91□□□□□ -0.66
VPREB3-201ENST00000248948 LINC00346Q8IVM7 164 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 HS3ST5Q8IZT8 346 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 OR2AJ1Q8NGZ0 328 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 APOBEC3DQ96AK3 386 aaPredicted RBP10.91□□□□□ -0.66
VPREB3-201ENST00000248948 DIRC2Q96SL1 478 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 SLC25A19Q9HC21 320 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
VPREB3-201ENST00000248948 HPXP02790 462 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 TACSTD2P09758 323 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 KITLGP21583 273 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 FASP25445 335 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 FMO3P31513 532 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 PYCR1P32322 319 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 ENTPD1P49961 510 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF81P51508 661 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 RIN1Q13671 783 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 CCNIQ14094 377 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 CARTPTQ16568 116 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 PCK2Q16822 640 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 TMEM255AQ5JRV8 349 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 CORO6Q6QEF8 472 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 CCDC121Q6ZUS5 278 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 HIPK1Q86Z02 1210 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 IQCF1Q8N6M8 205 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 OR5K1Q8NHB7 308 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 RDH5Q92781 318 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 PITX2Q99697 317 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 GABARAPL1Q9H0R8 117 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 PAPOLBQ9NRJ5 636 aaKnown RBP10.9□□□□□ -0.66
VPREB3-201ENST00000248948 ZDHHC8Q9ULC8 765 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 GRIP1Q9Y3R0 1128 aa10.9□□□□□ -0.66
VPREB3-201ENST00000248948 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
VPREB3-201ENST00000248948 SURF4O15260 269 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 PRODHO43272 600 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 TIMM8AO60220 97 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-201ENST00000248948 RP2O75695 350 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 HMGN1P05114 100 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 CD55P08174 381 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 DBHP09172 617 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 ZNF23P17027 643 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-201ENST00000248948 MAGEB1P43366 347 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 GZMKP49863 264 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 CHN2P52757 468 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 PPP2R2BQ00005 443 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 CDK5Q00535 292 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 DBPQ10586 325 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-201ENST00000248948 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
VPREB3-201ENST00000248948 OR5L1Q8NGL2 311 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 OR6K6Q8NGW6 343 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 SLC7A6Q92536 515 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 POM121Q96HA1 1249 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 C1QTNF5Q9BXJ0 243 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 ENOPH1Q9UHY7 261 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 AP4S1Q9Y587 144 aa10.89□□□□□ -0.67
VPREB3-201ENST00000248948 IGHV4-61A0A0C4DH41 118 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 TVP23AA6NH52 213 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 ZSCAN5BA6NJL1 495 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 IGHV1-46P01743 117 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 GYPBP06028 91 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 SPARCP09486 303 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 CLUP10909 449 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 RAC2P15153 192 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
VPREB3-201ENST00000248948 POU1F1P28069 291 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 PSG7Q13046 419 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 GINS1Q14691 196 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 MALRD1Q5VYJ5 2156 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 LYPD4Q6UWN0 246 aa10.88□□□□□ -0.67
VPREB3-201ENST00000248948 ZDHHC13Q8IUH4 622 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms