RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PRSS35Q8N3Z0 413 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 FAM160A2Q8N612 972 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CHST5Q9GZS9 411 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 DOCK2Q92608 1830 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 AQP7P3A6NL99 342 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 IQCF3P0C7M6 154 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 ACKR3P25106 362 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CSNK1A1P48729 337 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 NUBP1P53384 320 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 LGI3Q8N145 548 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 OR10C1Q96KK4 312 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 LINC00597Q9H2U6 94 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SLC35D1Q9NTN3 355 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3DA0A087WVF3 549 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3IA0A087WXS9 549 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 FEZF1A0PJY2 475 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3LB9A6J9 549 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 GLCEO94923 617 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 CSTAP01040 98 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 IL2RGP31785 369 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3CQ6IPX1 549 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3Q8IZP1 549 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 C17orf47Q8NEP4 570 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 HOXB13Q92826 284 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 WDR76Q9H967 626 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 PAM16Q9Y3D7 125 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 MT-CO2P00403 227 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 CHST14Q8NCH0 376 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 B4GALT6Q9UBX8 382 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 GJE1A6NN92 205 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 FCMRO60667 390 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 CTAG2O75638 210 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 CXCL14O95715 111 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 CD14P08571 375 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3HP0C7X1 549 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 BTF3P20290 206 aaKnown RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 PFN3P60673 137 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TGIF1Q15583 401 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 NKAIN1Q4KMZ8 207 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 PWWP2BQ6NUJ5 590 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF813Q6ZN06 617 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 NMNAT3Q96T66 252 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 NUDT9Q9BW91 350 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 MYOZ1Q9NP98 299 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 PLEKHJ1Q9NW61 149 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 A0A1B0GV72 72 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 APBA3O96018 575 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 THAP3Q8WTV1 239 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 OR5B2Q96R09 309 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
VAMP4-201ENST00000236192 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-201ENST00000236192 SFT2D2O95562 160 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 CHRM2P08172 466 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 BTCP35070 178 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 SLC6A9P48067 706 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 ARIH2OSQ8N7S6 290 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 ULBP3Q9BZM4 244 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 MASP2O00187 686 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 SCDO00767 359 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 ACTL6AO96019 429 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 ASGR1P07306 291 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 ADRA2CP18825 462 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.53
VAMP4-201ENST00000236192 MESTQ5EB52 335 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 CNKSR3Q6P9H4 555 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 OR52R1Q8NGF1 315 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 SUSD3Q96L08 255 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 G6PC3Q9BUM1 346 aa11.71□□□□□ -0.53
VAMP4-201ENST00000236192 MRPL17Q9NRX2 175 aaKnown RBP11.71□□□□□ -0.53
VAMP4-201ENST00000236192 CSRP3P50461 194 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 RD3Q7Z3Z2 195 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 ACY3Q96HD9 319 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 WDR92Q96MX6 357 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.54
VAMP4-201ENST00000236192 TAAR2Q9P1P5 351 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms