RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 KHSRPQ92945 711 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■□□□ 12.5
PRDM2-201ENST00000235372 NEIL2Q969S2 332 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 CRLF2Q9HC73 371 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SLC2A9Q9NRM0 540 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 LOC285556D6RIA3 1793 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SERINC4A6NH21 518 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SDHDO14521 159 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 OR8G3PP0DMU2 310 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RRASP10301 218 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 COX5AP20674 150 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 VEZF1Q14119 521 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ADIPOQQ15848 244 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 HAGHQ16775 308 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ZNF260Q3ZCT1 412 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 FAM71CQ8NEG0 241 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 OR51F2Q8NH61 342 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 TMEM18Q96B42 140 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ACY3Q96HD9 319 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RSRP1Q9BUV0 290 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 THYN1Q9P016 225 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SMLR1H3BR10 107 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 PMS2P2O95744 297 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 AIFM1O95831 613 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 HTN1P15515 57 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SLC6A11P48066 632 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RBP2P50120 134 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SNRPGP62308 76 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 PAFAH1B2P68402 229 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 OR2B11Q5JQS5 317 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 STUMQ69YW2 141 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 DNAJC5GQ8N7S2 189 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 OR1L4Q8NGR5 311 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 DYNC2LI1Q8TCX1 351 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RLN3Q8WXF3 142 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 C12orf42Q96LP6 360 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ZNF300Q96RE9 604 aaPredicted RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SEBOXQ9HB31 216 aaPredicted RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 CNOT2Q9NZN8 540 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 UFC1Q9Y3C8 167 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 AUP1Q9Y679 476 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 DDX60LQ5H9U9 1706 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 H0YGG7 62 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 H3BNC9 293 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 C1orf105O95561 183 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RNASE1P07998 156 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ACSM4P0C7M7 580 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 AOAHP28039 575 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 C18orf21Q32NC0 220 aaPredicted RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 TMEM268Q5VZI3 342 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 RGS7BPQ6MZT1 257 aaPredicted RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 SLC15A4Q8N697 577 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 TMEM56Q96MV1 263 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 MKRN2Q9H000 416 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 PCED1AQ9H1Q7 454 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 MED12Q93074 2177 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ZDBF2Q9HCK1 2354 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 A0A1B0GTQ1 180 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 PVRP15151 417 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 POU3F3P20264 500 aaPredicted RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 CSNK1EP49674 416 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 GPM6AP51674 278 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ERVPABLB-1P60509 514 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 UBE2MP61081 183 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 NFATC3Q12968 1075 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ALKBH6Q3KRA9 238 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 DOK3Q7L591 496 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 KMT5CQ86Y97 462 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 TGIF2LYQ8IUE0 185 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 BATF2Q8N1L9 274 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 PHOSPHO2Q8TCD6 241 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 UBTD2Q8WUN7 234 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 MARC2Q969Z3 335 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 VAMP8Q9BV40 100 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 ESRP2Q9H6T0 727 aaKnown RBP6.92□□□□□ -1.3
PRDM2-201ENST00000235372 FBXO8Q9NRD0 319 aa6.92□□□□□ -1.3
PRDM2-201ENST00000235372 GPR31O00270 319 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 GLIPR1L1Q6UWM5 242 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 SLC25A43Q8WUT9 341 aaPredicted RBP6.91□□□□□ -1.3
PRDM2-201ENST00000235372 ROBO4Q8WZ75 1007 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 C3orf30Q96M34 536 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 KCNG2Q9UJ96 466 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 OSGIN1Q9UJX0 560 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 SERPINE3A8MV23 424 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 H7C1C5 153 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 REEP5Q00765 189 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 HNRNPA1L2Q32P51 320 aaKnown RBP6.91□□□□□ -1.3
PRDM2-201ENST00000235372 AMMECR1LQ6DCA0 310 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 SPNS3Q6ZMD2 512 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 DPY19L2P2Q6ZN68 376 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 TMUB2Q71RG4 321 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 DOLPP1Q86YN1 238 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 ISG20Q96AZ6 181 aaKnown RBP6.91□□□□□ -1.3
PRDM2-201ENST00000235372 GALMQ96C23 342 aa6.91□□□□□ -1.3
PRDM2-201ENST00000235372 TXLNGYQ9BZA5 131 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms