RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZNF705BP0CI00 300 aaPredicted RBP17.07■□□□□ 0.32
MBD3-201ENST00000156825 CBR1P16152 277 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 EMP3P54852 163 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 SSTP61278 116 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 ESCO2Q56NI9 601 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 GLCCI1Q86VQ1 547 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 CMTM4Q8IZR5 234 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 PLPP5Q8NEB5 264 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 BORCS7Q96B45 105 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 ATF6BQ99941 703 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 OR6C76A6NM76 312 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 EIF4EP06730 217 aaKnown RBP17.07■□□□□ 0.32
MBD3-201ENST00000156825 CHRM2P08172 466 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 BAMBIQ13145 260 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 KIAA0040Q15053 153 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 CDK5R1Q15078 307 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 IGLV3-16A0A075B6K0 115 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 ZNF74Q16587 644 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 Q6ZNX1 250 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 WFDC8Q8IUA0 241 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 SLCO5A1Q9H2Y9 848 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 HIF1ANQ9NWT6 349 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 B3GAT1Q9P2W7 334 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 MBD1Q9UIS9 605 aaPredicted RBP17.07■□□□□ 0.32
MBD3-201ENST00000156825 A4GNTQ9UNA3 340 aa17.07■□□□□ 0.32
MBD3-201ENST00000156825 FRG2CA6NGY1 282 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 PRRG2O14669 202 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 GMDSO60547 372 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 OR5M9Q8NGP3 310 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 ST7LQ8TDW4 575 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 ARPC5LQ9BPX5 153 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 GABARAPH6UMI1 98 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 TOR1AO14656 332 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 CD160O95971 181 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 NME1P15531 152 aaKnown RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 INSM1Q01101 510 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 AQP6Q13520 282 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 C2orf76Q3KRA6 126 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 C3orf49Q96BT1 292 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 SMIM19Q96E16 107 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 SLC25A21Q9BQT8 299 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 BCKDHBP21953 392 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 WNT3P56703 355 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 WIPI1Q5MNZ9 446 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 LILRB4Q8NHJ6 448 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 TCTEX1D2Q8WW35 142 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 OXGR1Q96P68 337 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 FAM212BQ9NTI7 297 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 C20orf141Q9NUB4 165 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 B3GALT5Q9Y2C3 310 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 GPANK1O95872 356 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 PRSS35Q8N3Z0 413 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 DUS3LQ96G46 650 aaKnown RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 ZNF2Q9BSG1 426 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 ZCCHC4Q9H5U6 513 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 ERVMER34-1Q9H9K5 563 aa17.06■□□□□ 0.32
MBD3-201ENST00000156825 PLEKHB1Q9UF11 243 aaPredicted RBP17.06■□□□□ 0.32
MBD3-201ENST00000156825 CSF3P09919 207 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 ABCD3P28288 659 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 NOVA1P51513 510 aaKnown RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 HTRA4P83105 476 aaPredicted RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 LPCAT3Q6P1A2 487 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 Q7L0L9 218 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 DPPA2Q7Z7J5 298 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 OR10J5Q8NHC4 309 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 DYNC2LI1Q8TCX1 351 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 AUNIPQ9H7T9 357 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SLC39A9Q9NUM3 307 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 R4GN57 208 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 PRR35P0CG20 571 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 OR1L3Q8NH93 324 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SLC7A6Q92536 515 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 VN1R1Q9GZP7 353 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SIAEQ9HAT2 523 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 MEX3AA1L020 520 aaKnown RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 PMS2P2O95744 297 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 PRPH2P23942 346 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 S100A11P31949 105 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SLC17A1Q14916 467 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 EMC4Q5J8M3 183 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 HIST2H3PS2Q5TEC6 136 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 LAIR1Q6GTX8 287 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 UBL7Q96S82 380 aaPredicted RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 OPA3Q9H6K4 179 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 PRELID3BQ9Y3B1 194 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 LILRA5A6NI73 299 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 NRASP01111 189 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 ZNF133P52736 654 aaPredicted RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 LGALS4P56470 323 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 UBE2KP61086 200 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 BATFQ16520 125 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SLC25A35Q3KQZ1 300 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 OR11G2Q8NGC1 345 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 OR52N5Q8NH56 324 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 SPACA9Q96E40 222 aaPredicted RBP17.05■□□□□ 0.32
MBD3-201ENST00000156825 PBOV1Q9GZY1 135 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
MBD3-201ENST00000156825 IFITM5A6NNB3 132 aa17.04■□□□□ 0.32
MBD3-201ENST00000156825 SCAF4O95104 1147 aaKnown RBP17.04■□□□□ 0.32
MBD3-201ENST00000156825 SDHBP21912 280 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms