RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 DMRTC1Q5HYR2 192 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 PDZD9Q8IXQ8 264 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 CRB3Q9BUF7 120 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 MFRPQ9BY79 579 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
CTNS-201ENST00000046640 TAS2R4Q9NYW5 299 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 RARRES3Q9UL19 164 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 DHDHQ9UQ10 334 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 SNRPGP15A8MWD9 76 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 IL5P05113 134 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 ZNF823P16415 610 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 ZNF28P17035 718 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 RIDAP52758 137 aaKnown RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 DCDP81605 110 aaKnown RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 ZNF660Q6AZW8 331 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 CD163Q86VB7 1156 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 NFAM1Q8NET5 270 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 OR1S1Q8NH92 325 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 FAM3DQ96BQ1 224 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 CCDC74BQ96LY2 380 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 SRPK3Q9UPE1 567 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 PHF3Q92576 2039 aaKnown RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 TRBV5-7A0A0A0MS05 114 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 OR6C76A6NM76 312 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 FTCDNL1E5RQL4 147 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 OR2T1O43869 369 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 SFTPDP35247 375 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 MNDAP41218 407 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 BIDP55957 195 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 C17orf67Q0P5P2 114 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 TAF13Q15543 124 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 STEAP1BQ6NZ63 245 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 OR4S1Q8NGB4 309 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 TMEM234Q8WY98 164 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 MCHR2Q969V1 340 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 METTL7AQ9H8H3 244 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 PPP4R1LQ9P1A2 415 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 PATE3B3GLJ2 98 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 AMY2AP04746 511 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 KLK2P20151 261 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 AKR1C2P52895 323 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 GMFBP60983 142 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 MRPS10P82664 201 aaKnown RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 AKR1C1Q04828 323 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 HLA-BQ31612 363 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 GALNT16Q8N428 558 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 JAGN1Q8N5M9 183 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 RNF128Q8TEB7 428 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 SLC25A44Q96H78 314 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 WDR77Q9BQA1 342 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 PDCD10Q9BUL8 212 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 SHARPINQ9H0F6 387 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 SEC61A2Q9H9S3 476 aa11.73□□□□□ -0.53
CTNS-201ENST00000046640 RPH3AQ9Y2J0 694 aaPredicted RBP11.73□□□□□ -0.53
CTNS-201ENST00000046640 G3V3Y1 287 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 HSF1Q00613 529 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 KCTD18Q6PI47 426 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 KMT5CQ86Y97 462 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 BVESQ8NE79 360 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ASB5Q8WWX0 329 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ST8SIA2Q92186 375 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ZNF275Q9NSD4 429 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 VSX1Q9NZR4 365 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 ETV7Q9Y603 341 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 LY6G6EA0A0G2JKS1 128 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 P2RY10O00398 339 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 RAB3DO95716 219 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 CSF1P09603 554 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 EPHA8P29322 1005 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 CDAP32320 146 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 DHODHQ02127 395 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ACY1Q03154 408 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 BAMBIQ13145 260 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 RAB11BQ15907 218 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 TMEM225Q6GV28 225 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ANKRD16Q6P6B7 361 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 OR1J4Q8NGS1 313 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 OR1J2Q8NGS2 313 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 OR52N5Q8NH56 324 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
CTNS-201ENST00000046640 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 SLC25A28Q96A46 364 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 ZNF75AQ96N20 296 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 CMKLR1Q99788 373 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 PLEKHA6Q9Y2H5 1048 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 U3KQA8 63 aa11.72□□□□□ -0.53
CTNS-201ENST00000046640 TMEM269A0A1B0GVZ9 245 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 ANKUB1A6NFN9 424 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 VSTM2BA6NLU5 285 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms