RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 HTR5AP47898 357 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 EVX1P49640 407 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 CIARTQ8N365 385 aaPredicted RBP22.91■■□□□ 1.26
VEGFA-231ENST00000640499 OR1F12Q8NHA8 337 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 C4orf45Q96LM5 186 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 KIF17Q9P2E2 1029 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 PMF1-BGLAPU3KQ54 211 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 VSTM5A8MXK1 200 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 HLA-DQA2P01906 255 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 ZNF3P17036 446 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 PTGES3Q15185 160 aaKnown RBP22.9■■□□□ 1.26
VEGFA-231ENST00000640499 RAB35Q15286 201 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 KRTAP27-1Q3LI81 207 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 RGS7BPQ6MZT1 257 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-231ENST00000640499 GJC3Q8NFK1 279 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 OR1J1Q8NGS3 322 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 MARS2Q96GW9 593 aaKnown RBP22.9■■□□□ 1.26
VEGFA-231ENST00000640499 MAP6Q96JE9 813 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 BCL2L14Q9BZR8 327 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 NDRG4Q9ULP0 352 aaKnown RBP22.9■■□□□ 1.26
VEGFA-231ENST00000640499 POLR1DQ9Y2S0 133 aa22.9■■□□□ 1.26
VEGFA-231ENST00000640499 SAC3D1A6NKF1 404 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 SSX4O60224 188 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 LCKP06239 509 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 PPOXP50336 477 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 RPS23P62266 143 aaKnown RBP22.89■■□□□ 1.25
VEGFA-231ENST00000640499 PPP2R2BQ00005 443 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 PCK2Q16822 640 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 ZFP1Q6P2D0 407 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 OR10H5Q8NGA6 315 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 OR10S1Q8NGN2 331 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 RAB3IPQ96QF0 476 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-231ENST00000640499 POFUT1Q9H488 388 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 HINT3Q9NQE9 182 aaKnown RBP22.89■■□□□ 1.25
VEGFA-231ENST00000640499 KRT84Q9NSB2 600 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 DUSP13Q9UII6 198 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 COMMD3-BMI1R4GMX3 469 aa22.89■■□□□ 1.25
VEGFA-231ENST00000640499 IGLV3-9A0A075B6K5 115 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 HMGN1P05114 100 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 BMP4P12644 408 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 CD99P14209 185 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 POLR2IP36954 125 aaKnown RBP22.88■■□□□ 1.25
VEGFA-231ENST00000640499 EFNA4P52798 201 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 MAD2L1BPQ15013 274 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-231ENST00000640499 CLEC12BQ2HXU8 276 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 ELFN2Q5R3F8 820 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 SPATA46Q5T0L3 261 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 PLBD1Q6P4A8 553 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 CIB1Q99828 191 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 OSBPL10Q9BXB5 764 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 S100A14Q9HCY8 104 aa22.88■■□□□ 1.25
VEGFA-231ENST00000640499 EIF3KQ9UBQ5 218 aaKnown RBP22.88■■□□□ 1.25
VEGFA-231ENST00000640499 CHD3Q12873 2000 aaKnown RBP22.87■■□□□ 1.25
VEGFA-231ENST00000640499 F12P00748 615 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-231ENST00000640499 MPV17P39210 176 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ALDH3B1P43353 468 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ESRRGP62508 458 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 EFNB1P98172 346 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 TNK1Q13470 666 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ICA1LQ8NDH6 482 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 BBS1Q8NFJ9 593 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ABHD4Q8TB40 342 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 SLC25A40Q8TBP6 338 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 COQ7Q99807 217 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 VRK1Q99986 396 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-231ENST00000640499 BARX1Q9HBU1 254 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ATPIF1Q9UII2 106 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 KCNG2Q9UJ96 466 aa22.87■■□□□ 1.25
VEGFA-231ENST00000640499 ADRA2AP08913 450 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 ZNF823P16415 610 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 FMO3P31513 532 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 TEX30Q5JUR7 227 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 TMEM154Q6P9G4 183 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 CPOQ8IVL8 374 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 SYNPRQ8TBG9 265 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 CDADC1Q9BWV3 514 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 OR2J1Q9GZK6 312 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 HDHD2Q9H0R4 259 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 TBCCD1Q9NVR7 557 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 TVP23BQ9NYZ1 205 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 STARD10Q9Y365 291 aa22.86■■□□□ 1.25
VEGFA-231ENST00000640499 ZAR1LA6NP61 321 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 ZNF593O00488 134 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-231ENST00000640499 ABHD16AO95870 558 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 SLC2A5P22732 501 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 PPP1CBP62140 327 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 ZNF525Q8N782 197 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 OR6K6Q8NGW6 343 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 OTULINQ96BN8 352 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 OR51V1Q9H2C8 321 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 MARCH7Q9H992 704 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 GRIP1Q9Y3R0 1128 aa22.85■■□□□ 1.25
VEGFA-231ENST00000640499 PRR23D1E9PI22 279 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-231ENST00000640499 H7C1Q1 480 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 PRKYO43930 277 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 GLCEO94923 617 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 PRR23D2P0DMB1 279 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-231ENST00000640499 ENTPD1P49961 510 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 NUDT6P53370 316 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 ALKBH6Q3KRA9 238 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms