RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CSO75390 466 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CEACAM4O75871 244 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 IL1RNP18510 177 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 AGXTP21549 392 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GALCP54803 685 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ELFN2Q5R3F8 820 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR2Z1Q8NG97 314 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR6T1Q8NGN1 323 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 HIST1H2BAQ96A08 127 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 MIEN1Q9BRT3 115 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 VAMP8Q9BV40 100 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SLC6A20Q9NP91 592 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 COX11Q9Y6N1 276 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RGPD4Q7Z3J3 1758 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 URB1O60287 2271 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RCCD1A6NED2 376 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SHISA7A6NL88 538 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CYB561D2O14569 222 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TYMSP04818 313 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CFHP08603 1231 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PBX2P40425 430 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GUCA1AP43080 201 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RPL21P46778 160 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SULT1A2P50226 295 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SELENOWP63302 87 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GPRIN1Q7Z2K8 1008 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DEFB128Q7Z7B8 93 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RNF130Q86XS8 419 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 KLHDC8AQ8IYD2 350 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM130Q8N3G9 435 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DUSP18Q8NEJ0 188 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR10Q1Q8NGQ4 319 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PRAP1Q96NZ9 151 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RAB40CQ96S21 281 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 NMNAT2Q9BZQ4 307 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RCC2Q9P258 522 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LSM5Q9Y4Y9 91 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ANK1P16157 1881 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PLXNA4Q9HCM2 1894 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM235A6NFC5 223 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DHRS7CA6NNS2 312 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 HMSDA8MTL9 139 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 A8MVM7 634 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SPRY1O43609 319 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF432O94892 652 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 FPR2P25090 351 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SLC19A1P41440 591 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PRR5P85299 388 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SHHQ15465 462 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PIGZQ86VD9 579 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF547Q8IVP9 402 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CMTM1Q8IZ96 169 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 MUC15Q8N387 334 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR4K2Q8NGD2 314 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF564Q8TBZ8 553 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 IGSF8Q969P0 613 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 KCTD7Q96MP8 289 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 EFCAB11Q9BUY7 163 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PLK3Q9H4B4 646 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LRRC4CQ9HCJ2 640 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 MARCH5Q9NX47 278 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 NYNRINQ9P2P1 1898 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PIK3C2AO00443 1686 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 G3V3Q6 166 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SYNGR4O95473 234 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DBIP07108 87 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DUSP1P28562 367 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PTPN7P35236 360 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 KIR2DL3P43628 341 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF415Q09FC8 603 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF585BQ52M93 769 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CAPN13Q6MZZ7 669 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 WDR53Q7Z5U6 358 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LAS2Q8IYD9 372 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM217Q8N7C4 229 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SEC61A2Q9H9S3 476 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 EXOSC4Q9NPD3 245 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CEP170BQ9Y4F5 1589 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 USF3Q68DE3 2245 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 DBHP09172 617 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SMIM17P0DL12 118 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CD37P11049 281 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TAS2R30P59541 319 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 HIST1H3AP68431 136 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PAX2Q02962 417 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 UNQ6494/PRO21346Q6UXR6 183 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 HJURPQ8NCD3 748 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SLC26A10Q8NG04 563 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR1N2Q8NGR9 330 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 OR56B4Q8NH76 319 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 UCN3Q969E3 161 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 APH1AQ96BI3 265 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SFXN1Q9H9B4 322 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GALNT9Q9HCQ5 603 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SPHK2Q9NRA0 654 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ING1Q9UK53 422 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms