RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 HHATQ5VTY9 493 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 OR5AS1Q8N127 324 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 MREGQ8N565 214 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 SPERTQ8NA61 448 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 C19orf18Q8NEA5 215 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 OR13G1Q8NGZ3 307 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 PPP1R35Q8TAP8 253 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 NSMAFQ92636 917 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 R3HDM4Q96D70 268 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 ERVK-18Q9QC07 812 aa14.92□□□□□ -0.02
CLN6-212ENST00000636020 NDRG4Q9ULP0 352 aaKnown RBP14.92□□□□□ -0.02
CLN6-212ENST00000636020 CAB39Q9Y376 341 aaPredicted RBP14.92□□□□□ -0.02
CLN6-212ENST00000636020 A0A1W2PRG6 482 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 C5orf58C9J3I9 102 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 MCIDASD6RGH6 385 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 SPAG7O75391 227 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 HIST1H2ABP04908 130 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 F13BP05160 661 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 PCBD1P61457 104 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 FMODQ06828 376 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 SLC25A47Q6Q0C1 308 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 HIST3H2AQ7L7L0 130 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 HDDC2Q7Z4H3 204 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 OR5R1Q8NH85 324 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 HIST1H2ACQ93077 130 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 ZBTB18Q99592 522 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 TMCC3Q9ULS5 477 aa14.91□□□□□ -0.02
CLN6-212ENST00000636020 WI2-2373I1.2A0A1W2PRP0 233 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 BLOC1S5-TXNDC5H3BN57 136 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 CHP2O43745 196 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 FMO6PO60774 539 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 IL6P05231 212 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 COX5BP10606 129 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 RAC2P15153 192 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 IGLL1P15814 213 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 ARMC4Q5T2S8 1044 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 ZNF613Q6PF04 617 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 IGFN1Q86VF2 1251 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 RANBP3LQ86VV4 465 aaPredicted RBP14.9□□□□□ -0.02
CLN6-212ENST00000636020 WFDC9Q8NEX5 89 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 OR8G5Q8NG78 346 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 OR4F17Q8NGA8 305 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 NPRL2Q8WTW4 380 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 OR4F4Q96R69 305 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 B9D2Q9BPU9 175 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 SPATA5L1Q9BVQ7 753 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 ZNF446Q9NWS9 450 aa14.9□□□□□ -0.02
CLN6-212ENST00000636020 F5H5P2 479 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 MLNRO43193 412 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 LYPD3O95274 346 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 DAP3P51398 398 aaKnown RBP14.89□□□□□ -0.03
CLN6-212ENST00000636020 RPL18Q07020 188 aaKnown RBP14.89□□□□□ -0.03
CLN6-212ENST00000636020 ENDOGQ14249 297 aaKnown RBP14.89□□□□□ -0.03
CLN6-212ENST00000636020 NXNQ6DKJ4 435 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 NANOGNBQ7Z5D8 188 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 CALHM3Q86XJ0 350 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 KRT73Q86Y46 540 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 NFKBIDQ8NI38 313 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 HDAC2Q92769 488 aaKnown RBP14.89□□□□□ -0.03
CLN6-212ENST00000636020 C20orf27Q9GZN8 174 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 MMADHCQ9H3L0 296 aaPredicted RBP14.89□□□□□ -0.03
CLN6-212ENST00000636020 MEAF6Q9HAF1 191 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 SMURF1Q9HCE7 757 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 RAP2CQ9Y3L5 183 aa14.89□□□□□ -0.03
CLN6-212ENST00000636020 THY1P04216 161 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 UMPSP11172 480 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 IRF2P14316 349 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 GATA4P43694 442 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 RPL14P50914 215 aaKnown RBP14.88□□□□□ -0.03
CLN6-212ENST00000636020 CD47Q08722 323 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 FADDQ13158 208 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 OR2T2Q6IF00 324 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 PGBD2Q6P3X8 592 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 TTC33Q6PID6 262 aaPredicted RBP14.88□□□□□ -0.03
CLN6-212ENST00000636020 FOXL2NBQ6ZUU3 175 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 VMO1Q7Z5L0 202 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 SYT9Q86SS6 491 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 Q8TCH9 128 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 ITCHQ96J02 903 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 COG8Q96MW5 612 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 MCHR1Q99705 422 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 FN3KRPQ9HA64 309 aa14.88□□□□□ -0.03
CLN6-212ENST00000636020 STX18Q9P2W9 335 aaKnown RBP14.88□□□□□ -0.03
CLN6-212ENST00000636020 GMNCA6NCL1 334 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 ADARB2-AS1A8MUL3 147 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 CLIC1O00299 241 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 KPNA4O00629 521 aaPredicted RBP14.87□□□□□ -0.03
CLN6-212ENST00000636020 VSIG10L2P0DP72 767 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 ABCE1P61221 599 aaKnown RBP14.87□□□□□ -0.03
CLN6-212ENST00000636020 HOXA4Q00056 320 aaPredicted RBP14.87□□□□□ -0.03
CLN6-212ENST00000636020 CDONQ4KMG0 1287 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 REEP3Q6NUK4 255 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 METAP1DQ6UB28 335 aaPredicted RBP14.87□□□□□ -0.03
CLN6-212ENST00000636020 FBXW12Q6X9E4 464 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 NDUFA11Q86Y39 141 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 OR4C13Q8NGP0 309 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 OR2T6Q8NHC8 308 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 RAD21L1Q9H4I0 556 aa14.87□□□□□ -0.03
CLN6-212ENST00000636020 RMND5AQ9H871 391 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms