RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 AWAT1Q58HT5 328 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 TMEM236Q5W0B7 351 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 ZNF770Q6IQ21 691 aaPredicted RBP6.71□□□□□ -1.33
CLK1-215ENST00000621181 VRK2Q86Y07 508 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 MINDY2Q8NBR6 621 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 OR52P1PQ8NH57 321 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 MFSD8Q8NHS3 518 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 FCGR1BQ92637 280 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 TPD52L3Q96J77 140 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 CACYBPQ9HB71 228 aaKnown RBP6.71□□□□□ -1.33
CLK1-215ENST00000621181 INIPQ9NRY2 104 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 SELENONQ9NZV5 590 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 P2RX2Q9UBL9 471 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 FZR1Q9UM11 496 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 A3GALT2U3KPV4 340 aa6.71□□□□□ -1.33
CLK1-215ENST00000621181 A0A0G2JMP0 313 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 A0A0X1KG70 313 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 ARRDC5A6NEK1 342 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 M0R3G1 203 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 AKAP8O43823 692 aaKnown RBP6.71□□□□□ -1.34
CLK1-215ENST00000621181 NPIPB7O75200 414 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 ZNF432O94892 652 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 ARAFP10398 606 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 ANXA8P13928 327 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 TNFRSF1BP20333 461 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
CLK1-215ENST00000621181 RPS23P62266 143 aaKnown RBP6.71□□□□□ -1.34
CLK1-215ENST00000621181 LSM3P62310 102 aaKnown RBP6.71□□□□□ -1.34
CLK1-215ENST00000621181 DOC2BQ14184 412 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 LARS2Q15031 903 aaKnown RBP6.71□□□□□ -1.34
CLK1-215ENST00000621181 MSMPQ1L6U9 139 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 MICAQ29983 383 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 IFI44LQ53G44 452 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 GCNT6Q5T4J0 391 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 ZNF836Q6ZNA1 936 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 AHSA2Q719I0 299 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 CADM3Q8N126 398 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 OR4M2Q8NGB6 313 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 OR10G2Q8NGC3 310 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 STK35Q8TDR2 534 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 OXGR1Q96P68 337 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 COPS4Q9BT78 406 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 SUCNR1Q9BXA5 334 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 RACGAP1Q9H0H5 632 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 CALML5Q9NZT1 146 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 SEC14L4Q9UDX3 406 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CLK1-215ENST00000621181 DSPPQ9NZW4 1301 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 MPZL1O95297 269 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 BCHEP06276 602 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 NAT2P11245 290 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 PRG2P13727 222 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 AQP1P29972 269 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 GLRXP35754 106 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 SLC15A1P46059 708 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 PPP5CP53041 499 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 CRISP3P54108 245 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 MRPS11P82912 194 aaKnown RBP6.7□□□□□ -1.34
CLK1-215ENST00000621181 CBX3Q13185 183 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 SCARB2Q14108 478 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 DGCR6Q14129 220 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 MAPK11Q15759 364 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 PRR31Q5SQ13 230 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 CARD17Q5XLA6 110 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ACSM5Q6NUN0 579 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 C1orf229Q6ZS94 237 aaPredicted RBP6.7□□□□□ -1.34
CLK1-215ENST00000621181 SNX29P2Q8IUI4 249 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 BPIFB2Q8N4F0 458 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 NFKBIDQ8NI38 313 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 YIPF5Q969M3 257 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 KTI12Q96EK9 354 aaPredicted RBP6.7□□□□□ -1.34
CLK1-215ENST00000621181 DHRS1Q96LJ7 313 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 OR2M2Q96R28 347 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 SLC6A7Q99884 636 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 NIPSNAP1Q9BPW8 284 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 FUZQ9BT04 418 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 PTDSS2Q9BVG9 487 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ZNF416Q9BWM5 594 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 CDADC1Q9BWV3 514 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 DCSTAMPQ9H295 470 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 DDX28Q9NUL7 540 aaKnown RBP6.7□□□□□ -1.34
CLK1-215ENST00000621181 KIF17Q9P2E2 1029 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 B3GAT1Q9P2W7 334 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ZNF232Q9UNY5 417 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ZNF443Q9Y2A4 671 aaPredicted RBP6.7□□□□□ -1.34
CLK1-215ENST00000621181 POFUT2Q9Y2G5 429 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ENPP4Q9Y6X5 453 aa6.7□□□□□ -1.34
CLK1-215ENST00000621181 ZAR1LA6NP61 321 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 EFCAB9A8MZ26 197 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 FTCDNL1E5RQL4 147 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 FFAR1O14842 300 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 OR2T1O43869 369 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 NCR1O76036 304 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 KRT75O95678 551 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 RAB36O95755 333 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 OPN1SWP03999 348 aa6.69□□□□□ -1.34
CLK1-215ENST00000621181 ZNF35P13682 527 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms