RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 LYSMD2Q8IV50 215 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OR2AE1Q8NHA4 323 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 BIRC7Q96CA5 298 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ZNF714Q96N38 554 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NEU1Q99519 415 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 LPAR4Q99677 370 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ACOT8O14734 319 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SNNO75324 88 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 MELTFP08582 738 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 GLI4P10075 376 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 HOXD9P28356 352 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CCKARP32238 428 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SELPLGQ14242 412 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 REEP3Q6NUK4 255 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 TIFABQ6ZNK6 161 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CMTM4Q8IZR5 234 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CHST8Q9H2A9 424 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NAA60Q9H7X0 242 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 DZANK1Q9NVP4 752 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OR6C3Q9NZP0 311 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 HS3ST4Q9Y661 456 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 RRASP10301 218 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 IAPPP10997 89 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 HLA-GP17693 338 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 COX7A1P24310 79 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PLBD1Q6P4A8 553 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OR10J5Q8NHC4 309 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 TBX15Q96SF7 602 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 IGKV3-20P01619 116 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SLC25A4P12235 298 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ZP2Q05996 745 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OLIG3Q7RTU3 272 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NOXA1Q86UR1 476 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CLDN19Q8N6F1 224 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NETO1Q8TDF5 533 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 C19orf43Q9BQ61 176 aa9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NDRG4Q9ULP0 352 aaKnown RBP9.97□□□□□ -0.81
CNTNAP3B-211ENST00000612828 MON2Q7Z3U7 1717 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SRPX2O60687 465 aaPredicted RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CD72P21854 359 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NDST2P52849 883 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 GLCCI1Q86VQ1 547 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 EPHX3Q9H6B9 360 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PAQR5Q9NXK6 330 aaPredicted RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OR4C45A6NMZ5 311 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CNMDO75829 334 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ZNF25P17030 456 aaPredicted RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 IRS1P35568 1242 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SKP2Q13309 424 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ELAVL3Q14576 367 aaKnown RBP9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 GPNMBQ14956 572 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SLC36A2Q495M3 483 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SPRY3O43610 288 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PRB1P04280 392 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 DUSP8Q13202 625 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SLC17A1Q14916 467 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 PNLIPRP3Q17RR3 467 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CORO6Q6QEF8 472 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 TMEM207Q6UWW9 146 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 ZFAND1Q8TCF1 268 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 MUS81Q96NY9 551 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 CGREF1Q99674 301 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 OR52D1Q9H346 318 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 KLHL21Q9UJP4 597 aa9.96□□□□□ -0.81
CNTNAP3B-211ENST00000612828 SHROOM3Q8TF72 1996 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 UPK1AO00322 258 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 RFPL2O75678 378 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 CGB3P0DN86 165 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 CLDN17P56750 224 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ROM1Q03395 351 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 COTL1Q14019 142 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNAJC22Q8N4W6 341 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ASB17Q8WXJ9 295 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 NPY6RQ99463 290 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ELOVL1Q9BW60 279 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNAJB9Q9UBS3 223 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR5V1Q9UGF6 321 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DENRO43583 198 aaKnown RBP9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ARSAP15289 507 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 SSTR2P30874 369 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 NFATC3Q12968 1075 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 SPIN4Q56A73 249 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FBXL22Q6P050 247 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 UNQ9370/PRO34162Q6UXP9 181 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 KMT5CQ86Y97 462 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 C17orf78Q8N4C9 275 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ARHGAP39Q9C0H5 1083 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 HSPE1-MOB4S4R3N1 261 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ARRDC5A6NEK1 342 aa9.96□□□□□ -0.82
CNTNAP3B-211ENST00000612828 CHRM2P08172 466 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms