RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CENPMQ9NSP4 180 aa17.81■□□□□ 0.44
PNKP-215ENST00000600910 ERVK13-1Q9NX77 482 aa17.81■□□□□ 0.44
PNKP-215ENST00000600910 NDRG3Q9UGV2 375 aa17.81■□□□□ 0.44
PNKP-215ENST00000600910 PRR32B1ATL7 298 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 PSMD9O00233 223 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 IGKV3-15P01624 115 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 THBDP07204 575 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 CBR1P16152 277 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 GABARAPL2P60520 117 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 RAB35Q15286 201 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 C1QTNF12Q5T7M4 302 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ZNF322Q6U7Q0 402 aaPredicted RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 ZNF584Q8IVC4 421 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ALDH16A1Q8IZ83 802 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 CPEB3Q8NE35 698 aaKnown RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 LINC01560Q8TB33 94 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 RNF133Q8WVZ7 376 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ZNF649Q9BS31 505 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 HDHD2Q9H0R4 259 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 TUBAL3A6NHL2 446 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ZNF878C9JN71 531 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 C19orf84I3L1E1 186 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 MAGEB4O15481 346 aaPredicted RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 RGS10O43665 173 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 SYNGR3O43761 229 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 TNFAIP8O95379 198 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 MYL12AP19105 171 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ETV1P50549 477 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 IDH3GP51553 393 aaPredicted RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 PLP2Q04941 152 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 KCTD18Q6PI47 426 aaPredicted RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 LRRN1Q6UXK5 716 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 WFDC8Q8IUA0 241 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 MS4A3Q96HJ5 214 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 NR1H4Q96RI1 486 aaPredicted RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 SIGLEC11Q96RL6 698 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ATF6BQ99941 703 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 ALG8Q9BVK2 526 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 CCDC90BQ9GZT6 254 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 NPAP1Q9NZP6 1156 aa17.8■□□□□ 0.44
PNKP-215ENST00000600910 EXOSC1Q9Y3B2 195 aaKnown RBP17.8■□□□□ 0.44
PNKP-215ENST00000600910 IQCMA0A1B0GVH7 501 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 SERPINA5P05154 406 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 CELA3BP08861 270 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 HTR1AP08908 422 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 LIMS3P0CW19 117 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 LIMS4P0CW20 117 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 ZNF14P17017 642 aaPredicted RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 PAX7P23759 505 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 APEX1P27695 318 aaKnown RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 HTR5AP47898 357 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 ZNF83P51522 516 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 EGR3Q06889 387 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 GALEQ14376 348 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 KCTD21Q4G0X4 260 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 SEZ6L2Q6UXD5 910 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 SSX8Q7RTT4 187 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 KRT77Q7Z794 578 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 MYPOPQ86VE0 399 aaPredicted RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 OR1F12Q8NHA8 337 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 SNX33Q8WV41 574 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 OR8B4Q96RC9 309 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 MOV10Q9HCE1 1003 aaKnown RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 DDX28Q9NUL7 540 aaKnown RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 SLCO1C1Q9NYB5 712 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 CRNNQ9UBG3 495 aaPredicted RBP17.79■□□□□ 0.44
PNKP-215ENST00000600910 CLEC2DQ9UHP7 191 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 IKZF2Q9UKS7 526 aa17.79■□□□□ 0.44
PNKP-215ENST00000600910 PRR14LQ5THK1 2151 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 TENM4Q6N022 2769 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 OR6C6A6NF89 314 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 OPRL1P41146 370 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 CDH15P55291 814 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 ROM1Q03395 351 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 RHOUQ7L0Q8 258 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 PRSS48Q7RTY5 328 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 FAM169BQ8N8A8 192 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 SLC7A6Q92536 515 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 MROQ9BYG7 248 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 CHCHD3Q9NX63 227 aaKnown RBP17.78■□□□□ 0.44
PNKP-215ENST00000600910 FBXL3Q9UKT7 428 aa17.78■□□□□ 0.44
PNKP-215ENST00000600910 KLF2Q9Y5W3 355 aaPredicted RBP17.78■□□□□ 0.44
PNKP-215ENST00000600910 TRIM64A6NGJ6 449 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 IGLV1-44P01699 117 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 MT-ND2P03891 347 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 H2BFMP0C1H6 154 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 STOMP27105 288 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 TAF13Q15543 124 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 ZNF684Q5T5D7 378 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 ZNF679Q8IYX0 411 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 COQ7Q99807 217 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 CDCA4Q9BXL8 241 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 MRM2Q9UI43 246 aaKnown RBP17.77■□□□□ 0.44
PNKP-215ENST00000600910 LRP12Q9Y561 859 aa17.77■□□□□ 0.44
PNKP-215ENST00000600910 COL12A1Q99715 3063 aa17.77■□□□□ 0.43
PNKP-215ENST00000600910 IGHV1-18A0A0C4DH31 117 aa17.76■□□□□ 0.43
PNKP-215ENST00000600910 M0R1B8 84 aa17.76■□□□□ 0.43
PNKP-215ENST00000600910 PTHP01270 115 aa17.76■□□□□ 0.43
PNKP-215ENST00000600910 COX5BP10606 129 aa17.76■□□□□ 0.43
PNKP-215ENST00000600910 CCL2P13500 99 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms