RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 PPP1CBP62140 327 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 HIST1H3AP68431 136 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 TEKQ02763 1124 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 CRMP1Q14194 572 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 LYPD4Q6UWN0 246 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 LINC00346Q8IVM7 164 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 OR2T33Q8NG76 320 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 OR9Q1Q8NGQ5 310 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 OR1F12Q8NHA8 337 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 PIMREGQ9BSJ6 248 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 POFUT1Q9H488 388 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 YY1AP1Q9H869 796 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
LIG3-215ENST00000592690 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 BAIAP2Q9UQB8 552 aa13.44□□□□□ -0.26
LIG3-215ENST00000592690 ABCA2Q9BZC7 2435 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 NIPBLQ6KC79 2804 aaeCLIP13.43□□□□□ -0.26
LIG3-215ENST00000592690 LOC390937A0A1W2PQ73 354 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 NDUFS8O00217 210 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 NCR1O76036 304 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 ABHD16AO95870 558 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 IGHV3-13P01766 116 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 HLA-DQA2P01906 255 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 HPXP02790 462 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 DBHP09172 617 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 PRKACGP22612 351 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 SELENOVP59797 346 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 COX10Q12887 443 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 ZNF718Q3SXZ3 478 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 PROKR2Q8NFJ6 384 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 GJC3Q8NFK1 279 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 OR51L1Q8NGJ5 315 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 TEX47Q8TBZ9 253 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 KLF14Q8TD94 323 aaPredicted RBP13.43□□□□□ -0.26
LIG3-215ENST00000592690 UBASH3BQ8TF42 649 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 RBM4Q9BWF3 364 aaKnown RBP13.43□□□□□ -0.26
LIG3-215ENST00000592690 ELOVL3Q9HB03 270 aa13.43□□□□□ -0.26
LIG3-215ENST00000592690 MALRD1Q5VYJ5 2156 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 TVP23AA6NH52 213 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 H3BN98 237 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 GYPBP06028 91 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 CLUP10909 449 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 PSKH1P11801 424 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 HOXB4P17483 251 aaPredicted RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 GCH1P30793 250 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 GGT2P36268 569 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 NR4A2P43354 598 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 MAGEB1P43366 347 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 CCNIQ14094 377 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 GGTLC2Q14390 218 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 ELFN2Q5R3F8 820 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 MBNL2Q5VZF2 373 aaKnown RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 SLC18B1Q6NT16 456 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 UNQ6126/PRO20091Q6UXV3 157 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 ZNF786Q8N393 782 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 OR2T4Q8NH00 348 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 SNX33Q8WV41 574 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 UTP4Q969X6 686 aaKnown RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 NMNAT2Q9BZQ4 307 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 HINT3Q9NQE9 182 aaKnown RBP13.42□□□□□ -0.26
LIG3-215ENST00000592690 SLCO1C1Q9NYB5 712 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 KLHL21Q9UJP4 597 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 GRIP1Q9Y3R0 1128 aa13.42□□□□□ -0.26
LIG3-215ENST00000592690 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 RIIAD1A6NNX1 92 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 C17orf100A8MU93 164 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 USF1P22415 310 aaPredicted RBP13.41□□□□□ -0.26
LIG3-215ENST00000592690 GIFP27352 417 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 RPS27P42677 84 aaKnown RBP13.41□□□□□ -0.26
LIG3-215ENST00000592690 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 TMEM249Q2WGJ8 235 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 TMEM154Q6P9G4 183 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 ARL9Q6T311 187 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 COQ7Q99807 217 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 HDHD2Q9H0R4 259 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
LIG3-215ENST00000592690 CMC2Q9NRP2 79 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 TBCCD1Q9NVR7 557 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 CYB5R1Q9UHQ9 305 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 GPR160Q9UJ42 338 aa13.41□□□□□ -0.26
LIG3-215ENST00000592690 IGHV4-61A0A0C4DH41 118 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 ZSCAN5BA6NJL1 495 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 FAM183AA6NL82 134 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 INAFM1C9JVW0 142 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 H3BSA7 217 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 CD5LO43866 347 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 DEAF1O75398 565 aaPredicted RBP13.4□□□□□ -0.26
LIG3-215ENST00000592690 IFNGP01579 166 aa13.4□□□□□ -0.26
LIG3-215ENST00000592690 ANXA8P13928 327 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms