RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 DDOQ99489 341 aa13.12□□□□□ -0.31
RETREG3-208ENST00000589797 CHD7Q9P2D1 2997 aa13.12□□□□□ -0.31
RETREG3-208ENST00000589797 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 INHBBP09529 407 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 FAPQ12884 760 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ADGRG3Q86Y34 549 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 D2HGDHQ8N465 521 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ZNF565Q8N9K5 539 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 OR52N5Q8NH56 324 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 FBLIM1Q8WUP2 373 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 SORCS2Q96PQ0 1159 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 EXOGQ9Y2C4 368 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 DSPPQ9NZW4 1301 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 LANCL1O43813 399 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 RAD51DO75771 328 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CD3DP04234 171 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 SKP2Q13309 424 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 PDCD1Q15116 288 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 LSMEM1Q8N8F7 131 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 PAPOLGQ9BWT3 736 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CYSLTR2Q9NS75 346 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MRM2Q9UI43 246 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 NOSIPQ9Y314 301 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 IGHV5-10-1A0A0J9YXX1 117 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CSF1P09603 554 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 B4GALT1P15291 398 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ENPP1P22413 925 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 GLP1RP43220 463 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 RAD52P43351 418 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 RFX2P48378 723 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MGAT2Q10469 447 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MRPL21Q7Z2W9 205 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 OR4S1Q8NGB4 309 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ARGFXA6NJG6 315 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MPLP40238 635 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CX3CR1P49238 355 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 FOXK1P85037 733 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 C6orf15Q6UXA7 325 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 OR10A2Q9H208 303 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ZNF407Q9C0G0 2248 aa13.11□□□□□ -0.31
RETREG3-208ENST00000589797 ABCA4P78363 2273 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 RP2O75695 350 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 S100GP29377 79 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 MAP2K6P52564 334 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 AKR7LQ8NHP1 331 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 B3GALT5Q9Y2C3 310 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 WIF1Q9Y5W5 379 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 TCRBV16S1A1N1A0A5B0 115 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 SC5DO75845 299 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ICAM2P13598 275 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 GNRHRP30968 328 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 CCR9P51686 369 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 FZD5Q13467 585 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 PLCXD3Q63HM9 321 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 C17orf107Q6ZR85 190 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ST8SIA1Q92185 356 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ZBTB8AQ96BR9 441 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ZNF501Q96CX3 271 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 RASL10BQ96S79 203 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 EHFQ9NZC4 300 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 V9GYH0 126 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 TMEM82A0PJX8 343 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 PTP4A3O75365 173 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 TNFSF15O95150 251 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 NPY4RP50391 375 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 MEX3BQ6ZN04 569 aaKnown RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ZNF454Q8N9F8 522 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 ZNF721Q8TF20 911 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 LUZP4Q9P127 313 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 HIF3AQ9Y2N7 669 aa13.1□□□□□ -0.31
RETREG3-208ENST00000589797 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
RETREG3-208ENST00000589797 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
RETREG3-208ENST00000589797 C12orf45Q8N5I9 185 aaPredicted RBP13.09□□□□□ -0.31
RETREG3-208ENST00000589797 SLC38A9Q8NBW4 561 aa13.09□□□□□ -0.31
RETREG3-208ENST00000589797 OR8B4Q96RC9 309 aa13.09□□□□□ -0.31
RETREG3-208ENST00000589797 JAM3Q9BX67 310 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms