RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ZNF404Q494X3 552 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 RABL3Q5HYI8 236 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 OTPQ5XKR4 325 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 LRRN1Q6UXK5 716 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 ALDH16A1Q8IZ83 802 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 OR10AD1Q8NGE0 317 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 RASSF5Q8WWW0 418 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 RAB40AQ8WXH6 277 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 TMEM246Q9BRR3 403 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 A4GNTQ9UNA3 340 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 NDUFAF1Q9Y375 327 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 MED31Q9Y3C7 131 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 TRAV27A0A087WT01 109 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 C12orf71A8MTZ7 269 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 H0YL77 283 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 SELEP16581 610 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 TNFSF4P23510 183 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 CPT2P23786 658 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 HTR5AP47898 357 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 NFYCQ13952 458 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 HLXQ14774 488 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF181Q2M3W8 571 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 MESTQ5EB52 335 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FAM201AQ5SY85 155 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FAM205BPQ63HN1 556 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 NANOGP8Q6NSW7 305 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 Q6YL49 198 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FAM122BQ7Z309 247 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FAM156AQ8NDB6 213 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 OR10S1Q8NGN2 331 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 FNDC8Q8TC99 324 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 BPIFA2Q96DR5 249 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 RBP7Q96R05 134 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 ADAM18Q9Y3Q7 739 aa11.49□□□□□ -0.57
CLPTM1-208ENST00000588274 SGCEO43556 437 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 KNG1P01042 644 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 DBHP09172 617 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 MMP9P14780 707 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 RAC2P15153 192 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 CTLA4P16410 223 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 CTXN1P60606 82 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 FGF12P61328 243 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 SCRN3Q0VDG4 424 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 CCDC92Q53HC0 331 aaPredicted RBP11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 ASPHD2Q6ICH7 369 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 MICU2Q8IYU8 434 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 OR5AS1Q8N127 324 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 OR13C2Q8NGS9 318 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 SLC26A7Q8TE54 656 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 WACQ9BTA9 647 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 MMP27Q9H306 513 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 RABEP2Q9H5N1 569 aa11.48□□□□□ -0.57
CLPTM1-208ENST00000588274 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 TEX13CA0A0J9YWL9 993 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 IGHV3-64DA0A0J9YX35 117 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 A6NIZ1 184 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 J3QW42 95 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 CDC42EP2O14613 210 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 IMPA2O14732 288 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 FFAR1O14842 300 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 ANGPT2O15123 496 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 FCN3O75636 299 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 MELTFP08582 738 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 IFI30P13284 250 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 PSMB10P40306 273 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 RAP1BP61224 184 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 RAP1AP62834 184 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 GNB2P62879 340 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 GUCY1A3Q02108 690 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 AQP6Q13520 282 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF362Q5T0B9 420 aaPredicted RBP11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 SLC27A4Q6P1M0 643 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 ARL9Q6T311 187 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 FIP1L1Q6UN15 594 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 OR8G5Q8NG78 346 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 OR51A7Q8NH64 312 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 PRRC1Q96M27 445 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF583Q96ND8 569 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 SLC30A2Q9BRI3 323 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 NUDT16L1Q9BRJ7 211 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms