RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 LCKP06239 509 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 HIST1H1CP16403 213 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 CTLA4P16410 223 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF26P17031 533 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF3P17036 446 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GLO1Q04760 184 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 RIN1Q13671 783 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PABPC1L2AQ5JQF8 200 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FAM27BQ5VT28 67 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NMNAT3Q96T66 252 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FEVQ99581 238 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 WACQ9BTA9 647 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NUAK2Q9H093 628 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 EMC7Q9NPA0 242 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 POLE4Q9NR33 117 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ARMC1Q9NVT9 282 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NDRG4Q9ULP0 352 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
CDK5RAP3-234ENST00000584525 DOK2O60496 412 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 RGS9O75916 674 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF823P16415 610 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF14P17017 642 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 RAD52P43351 418 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ACTG1P63261 375 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 AQP6Q13520 282 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 RGS7BPQ6MZT1 257 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PTCHD4Q6ZW05 846 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 MYPOPQ86VE0 399 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GLCCI1Q86VQ1 547 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PAPD5Q8NDF8 572 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR2AJ1Q8NGZ0 328 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR2T4Q8NH00 348 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR5K1Q8NHB7 308 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 AKR7LQ8NHP1 331 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZFAND2BQ8WV99 257 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NMD3Q96D46 503 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR51B6Q9H340 312 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 IL20Q9NYY1 176 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF224Q9NZL3 707 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 UGT2A1Q9Y4X1 527 aa11.25□□□□□ -0.61
CDK5RAP3-234ENST00000584525 A0A1W2PPW3 197 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 C5orf49A4QMS7 147 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 G3V2T6 193 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 IGFBP1P08833 259 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FAM157BP0CG42 384 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 STOMP27105 288 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 HTR5AP47898 357 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF770Q6IQ21 691 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SLC27A4Q6P1M0 643 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SHQ1Q6PI26 577 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ASRGL1Q7L266 308 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZDHHC13Q8IUH4 622 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 C3orf56Q8N813 242 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SEMA6DQ8NFY4 1073 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FGFBP3Q8TAT2 258 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SNX33Q8WV41 574 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF416Q9BWM5 594 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 BCL2L14Q9BZR8 327 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR2H1Q9GZK4 316 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FN3KQ9H479 309 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NARFLQ9H6Q4 476 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PAPOLBQ9NRJ5 636 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 HIF1ANQ9NWT6 349 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 B9D1Q9UPM9 204 aa11.24□□□□□ -0.61
CDK5RAP3-234ENST00000584525 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 BHLHE40O14503 412 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 SGCEO43556 437 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 HMGN1P05114 100 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 CCL2P13500 99 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OSMP13725 252 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 NR4A1P22736 598 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GCH1P30793 250 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GRK5P34947 590 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GPR6P46095 362 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 LSM6P62312 80 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 PSG4Q00888 419 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ATP6AP1Q15904 470 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 CD300LDQ6UXZ3 194 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 FOXL2NBQ6ZUU3 175 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 CYB561A3Q8NBI2 242 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 GJC3Q8NFK1 279 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 OR6K6Q8NGW6 343 aa11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-234ENST00000584525 C11orf40Q8WZ69 217 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms