RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 RBM45Q8IUH3 476 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 BCL6BQ8N143 479 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 SYT14Q8NB59 555 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 DEFB108BQ8NET1 73 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 BHLHE22Q8NFJ8 381 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 AKR7LQ8NHP1 331 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC25A40Q8TBP6 338 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ST7LQ8TDW4 575 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ADAMTS16Q8TE57 1224 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 LRRC58Q96CX6 371 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 TRIM44Q96DX7 344 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 MAP6Q96JE9 813 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 EBF4Q9BQW3 602 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 CPPED1Q9BRF8 314 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 LRMDAQ9H2I8 198 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 EVA1AQ9H8M9 152 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 MMP26Q9NRE1 261 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PURGQ9UJV8 347 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF229Q9UJW7 825 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC7A7Q9UM01 511 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 TGP01266 2768 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 LOC100509620A0A075B734 347 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 IGKV1D-43A0A0B4J1Z2 117 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 C5orf49A4QMS7 147 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 EVPLLA8MZ36 301 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MCIDASD6RGH6 385 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 BLOC1S5-TXNDC5H3BN57 136 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 M0QX08 132 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 POLR3GO15318 223 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MGRN1O60291 552 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 FOXH1O75593 365 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 TRMUO75648 421 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 TIPRLO75663 272 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 IGHV2-70P01814 119 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 HIST1H2ABP04908 130 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF32P17041 273 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 PRTN3P24158 256 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 STOMP27105 288 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 GCH1P30793 250 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC6A9P48067 706 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MRPL19P49406 292 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 UGT2B15P54855 530 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 SEC61A1P61619 476 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 ERVK-25P63136 954 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 FMODQ06828 376 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 RPL18Q07020 188 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 SELPLGQ14242 412 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MOGQ16653 247 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF718Q3SXZ3 478 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 KLF17Q5JT82 389 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 FAM205BPQ63HN1 556 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 RBMS3Q6XE24 437 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 DOK3Q7L591 496 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 HIST3H2AQ7L7L0 130 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 PFN4Q8NHR9 129 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 ASB10Q8WXI3 467 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 HIST1H2ACQ93077 130 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 POP5Q969H6 163 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 NABP1Q96AH0 204 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MARS2Q96GW9 593 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 POM121L2Q96KW2 1035 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 DCLRE1CQ96SD1 692 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF426Q9BUY5 554 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MRPL13Q9BYD1 178 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 PARD6BQ9BYG5 372 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 OR2J1Q9GZK6 312 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 SMURF2Q9HAU4 748 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MSL2Q9HCI7 577 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 CCNB1IP1Q9NPC3 277 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 MEPEQ9NQ76 525 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 NKIRAS1Q9NYS0 192 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 NUP50Q9UKX7 468 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 NPTNQ9Y639 398 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 GMEB1Q9Y692 573 aa6.57□□□□□ -1.36
SMCHD1-210ENST00000583800 PRKDCP78527 4128 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PPIAL4CA0A0B4J2A2 164 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 A0A1W2PRG6 482 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 TRAPPC13A5PLN9 417 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 TRAPPC2LH3BP13 241 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 NGFP01138 241 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 IGHMP01871 453 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ADH4P08319 380 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SBK2P0C263 348 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ACADSP16219 412 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF12P17014 697 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 AQP2P41181 271 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 GDI2P50395 445 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ATP4BP51164 291 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF133P52736 654 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 MTPNP58546 118 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 MAGOHP61326 146 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms