RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 WNT4P56705 351 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 DCDC1P59894 354 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 DSTNP60981 165 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SRP54P61011 504 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 BDH1Q02338 343 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PRKCZQ05513 592 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF763Q0D2J5 394 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C2orf80Q0P641 193 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HEPACAMQ14CZ8 416 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TAF13Q15543 124 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC5A12Q1EHB4 618 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TMEM44Q2T9K0 475 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HLA-BQ31612 363 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF658BQ4V348 819 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MPPE1Q53F39 396 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HSD17B12Q53GQ0 312 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PYDC2Q56P42 97 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SYT14P1Q58G82 188 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 RIPPLY2Q5TAB7 128 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HIST2H2AA3Q6FI13 130 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ACSM5Q6NUN0 579 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 FUT10Q6P4F1 479 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 WDR88Q6ZMY6 472 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TMPRSS11FQ6ZWK6 438 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HDDC2Q7Z4H3 204 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ASPGQ86U10 573 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC51BQ86UW2 128 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 APCDD1Q8J025 514 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CADM2Q8N3J6 435 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 Q8N402 240 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 RNF175Q8N4F7 328 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TBC1D19Q8N5T2 526 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ARIH2OSQ8N7S6 290 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TCEANCQ8N8B7 351 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C19orf18Q8NEA5 215 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 GPR32P1Q8NGA4 272 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OR4M1Q8NGD0 313 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OR2AP1Q8NGE2 309 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OR2L2Q8NH16 312 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OR52J3Q8NH60 311 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 VANGL1Q8TAA9 524 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF461Q8TAF7 563 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ENKURQ8TC29 256 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 GNPDA2Q8TDQ7 276 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ELMO1Q92556 727 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 UBE2E3Q969T4 207 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TMEM186Q96B77 213 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CREB3L1Q96BA8 519 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PPCDCQ96CD2 204 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 NEURL3Q96EH8 262 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ATF6BQ99941 703 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF649Q9BS31 505 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TTYH2Q9BSA4 534 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 EFCAB11Q9BUY7 163 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TSSK6Q9BXA6 273 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 BBS2Q9BXC9 721 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 RAB11FIP5Q9BXF6 653 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 RSPO3Q9BXY4 272 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 EBPLQ9BY08 206 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF717Q9BY31 904 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 NLNQ9BYT8 704 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ATG10Q9H0Y0 220 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 POLR2J3Q9H1A7 115 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 S1PR5Q9H228 398 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C12orf10Q9HB07 376 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CDH20Q9HBT6 801 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 BCL2L10Q9HD36 194 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 EXOSC4Q9NPD3 245 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 FANCFQ9NPI8 374 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SOHLH2Q9NX45 425 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TAS2R16Q9NYV7 291 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 AHSPQ9NZD4 102 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 STOX2Q9P2F5 926 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 EIF3KQ9UBQ5 218 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 EXTL2Q9UBQ6 330 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 UBQLN2Q9UHD9 624 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 GPR132Q9UNW8 380 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ANGPT4Q9Y264 503 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ALG5Q9Y673 324 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 FRMPD3Q5JV73 1810 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PLXNB3Q9ULL4 1909 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 TRBV4-1A0A0J9YWV2 114 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 FAM240BA0A1B0GVZ2 78 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 GNG14A0A1W2PPG7 69 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A1W2PPQ1 181 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 TSPAN11A1L157 253 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 ANKRD61A6NGH8 418 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 TUBAL3A6NHL2 446 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 WASHC1A8K0Z3 465 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 ARHGEF33A8MVX0 844 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 EPM2AB3EWF7 344 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 E7EQ34 232 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 INMT-MINDY4F8WBC2 141 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 J3QRE1 110 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 K7ERQ8 282 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 WWP2O00308 870 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 SOCS3O14543 225 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 TO15178 435 aa3.32□□□□□ -1.88
SMCHD1-208ENST00000583344 FLRT2O43155 660 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms