RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SLC28A1	O00337	649 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PFDN6	O15212	129 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	DNPH1	O43598	174 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	TRMU	O75648	421 aa	Known RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	WDR47	O94967	919 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ANGPTL1	O95841	491 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	NPPA	P01160	153 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PDYN	P01213	254 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	IGHV3-13	P01766	116 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	S100B	P04271	92 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	OR8G3P	P0DMU2	310 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	UMPS	P11172	480 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PCNA	P12004	261 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	FCGR1A	P12314	374 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	BCKDHA	P12694	445 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CD247	P20963	164 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	EEF1B2	P24534	225 aa	Known RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CDKN2C	P42773	168 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CLK3	P49761	638 aa	Known RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	RGS4	P49798	205 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF81	P51508	661 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	RPS6KA3	P51812	740 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	BMX	P51813	675 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	HPCA	P84074	193 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	TNP2	Q05952	138 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SELENBP1	Q13228	472 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PMS2P3	Q13401	168 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PTGR1	Q14914	329 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SRSF7	Q16629	238 aa	Known RBP eCLIP	3.85	□□□□□ -1.79	2e-9	■■■□□ 16.9
MSI2-216	ENST00000582772	SMU1	Q2TAY7	513 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ZBED5	Q49AG3	693 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	AP1AR	Q63HQ0	302 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	C18orf63	Q68DL7	685 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SULT1C3	Q6IMI6	304 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	RGS7BP	Q6MZT1	257 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	TTC33	Q6PID6	262 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	BAIAP2L2	Q6UXY1	529 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	FRA10AC1	Q70Z53	315 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	UBE2R2	Q712K3	238 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	VMO1	Q7Z5L0	202 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	MARCH3	Q86UD3	253 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	GPR180	Q86V85	440 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ERI1	Q8IV48	349 aa	Known RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CCDC36	Q8IYA8	594 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	MICU2	Q8IYU8	434 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ALDH16A1	Q8IZ83	802 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	TRIML2	Q8N7C3	387 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	OR8J3	Q8NGG0	315 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	OR8U1	Q8NH10	309 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PIGX	Q8TBF5	258 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	DEFB104A	Q8WTQ1	72 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	EFHD2	Q96C19	240 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	AURKB	Q96GD4	344 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	MEGF10	Q96KG7	1140 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	PPP3R2	Q96LZ3	170 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	DMRTB1	Q96MA1	342 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	NSMCE2	Q96MF7	247 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	VSTM2L	Q96N03	204 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CCDC115	Q96NT0	180 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	EGFL8	Q99944	293 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ACPT	Q9BZG2	426 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF350	Q9GZX5	532 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SIRT7	Q9NRC8	400 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SMPD3	Q9NY59	655 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	MAT2B	Q9NZL9	334 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	FLRT3	Q9NZU0	649 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	OPTC	Q9UBM4	332 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CGGBP1	Q9UFW8	167 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	RSL24D1	Q9UHA3	163 aa	Known RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	MAGEL2	Q9UJ55	1249 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	LPA	P08519	4548 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A096LPI6	279 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A1W2PNR3	127 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A1W2PS29	197 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ELOVL7	A1L3X0	281 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	MEIOC	A2RUB1	952 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	FAM220BP	B1ANY3	271 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772		H0YAE9	185 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772		H3BMQ9	156 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ETV2	O00321	342 aa	Predicted RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	CXCR6	O00574	342 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	RNASET2	O00584	256 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	SEC22B	O75396	215 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	STK16	O75716	305 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	KCNH1	O95259	989 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	LGI1	O95970	557 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP1B1	P05026	303 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ALPL	P05186	524 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	HTR1A	P08908	422 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	RAP2A	P10114	183 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	IL7R	P16871	459 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	JUNB	P17275	347 aa	Predicted RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	SDC1	P18827	310 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	MATN1	P21941	496 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PRKACG	P22612	351 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	LOR	P23490	312 aa	Predicted RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PSMB10	P40306	273 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms