RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GLAP06280 429 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 RAB3AP20336 220 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 P2RX1P51575 399 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 TPMTP51580 245 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 VSX2P58304 361 aaPredicted RBP1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 CCNA1P78396 465 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 GUSBP11Q6P575 273 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF664Q8N3J9 261 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF680Q8NEM1 530 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 OR52M1Q8NGK5 317 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF502Q8TBZ5 544 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 SLC7A13Q8TCU3 470 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 WDR34Q96EX3 536 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 COL21A1Q96P44 957 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 RBBP8Q99708 897 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 GON7Q9BXV9 100 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 ETNK2Q9NVF9 386 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 IKZF2Q9UKS7 526 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 ISY1Q9ULR0 285 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 KCNE3Q9Y6H6 103 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 SCN1AP35498 2009 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 SHANK1Q9Y566 2161 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 A0A1B0GW55 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 NUPL2O15504 423 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 SLC22A5O76082 557 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 EIF4EP06730 217 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 CRYGBP07316 175 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4L2P0CJ85 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4L3P0CJ86 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4L5P0CJ88 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4L6P0CJ89 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4L7P0CJ90 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 GLRA2P23416 452 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 GPX4P36969 197 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 TCEAL5Q5H9L2 206 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 KDELC1Q6UW63 502 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 EGFL6Q8IUX8 553 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 OR2L3Q8NG85 312 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 OR10AD1Q8NGE0 317 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 OR5B3Q8NH48 314 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 KLF14Q8TD94 323 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 TCEAL3Q969E4 200 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 IP6K3Q96PC2 410 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 OR5B12Q96R08 314 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 RHOXF2Q9BQY4 288 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 RSG1Q9BU20 258 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 EXOSC4Q9NPD3 245 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 C21orf62Q9NYP8 219 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 DUX4Q9UBX2 424 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 BLOC1S6Q9UL45 172 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 VANGL2Q9ULK5 521 aa1.3□□□□□ -2.2
SMCHD1-206ENST00000581631 IGHV7-4-1A0A0J9YVY3 117 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF878C9JN71 531 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CYB5R3P00387 301 aaPredicted RBP1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 IGLV6-57P01721 117 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CTSLP07711 333 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 PABPC4LP0CB38 370 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CD37P11049 281 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CSNK1EP49674 416 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CCNHP51946 323 aaPredicted RBP1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 ARFIP1P53367 373 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 PPP1CBP62140 327 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 IL24Q13007 206 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 CTSL3PQ5NE16 218 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 FAM222AQ5U5X8 452 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 TMEM136Q6ZRR5 245 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 NIPA1Q7RTP0 329 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF101Q8IZC7 436 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 COX18Q8N8Q8 333 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 BHLHE23Q8NDY6 225 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 OR8J1Q8NGP2 316 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 RSPH1Q8WYR4 309 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 GGTLC1Q9BX51 225 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 FGF20Q9NP95 211 aaPredicted RBP1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 MYO16Q9Y6X6 1858 aa1.29□□□□□ -2.2
SMCHD1-206ENST00000581631 BICDL2A1A5D9 508 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 GABRR3A8MPY1 467 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 NDC80O14777 642 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 NVLO15381 856 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 SPAG6O75602 509 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 NDUFB10O96000 172 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 GGT1P19440 569 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 HNRNPH3P31942 346 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 CRYBB2P43320 205 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 PRLHRP49683 370 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 SYNJ2BPP57105 145 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 PLP1P60201 277 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 TGM3Q08188 693 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 FAM53BQ14153 422 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 QPRTQ15274 297 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 OR7A5Q15622 319 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 TEX30Q5JUR7 227 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 STUMQ69YW2 141 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 ADNP2Q6IQ32 1131 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 NKAIN4Q8IVV8 208 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 B3GNT7Q8NFL0 401 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 OR2A1Q8NGT9 310 aa1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 DUS3LQ96G46 650 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 DNAJC1Q96KC8 554 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF317Q96PQ6 595 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms