RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 LAMP5Q9UJQ1 280 aa12.59□□□□□ -0.39
NPLOC4-218ENST00000574964 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.39
NPLOC4-218ENST00000574964 IGHV2OR16-5A0A0B4J2B6 119 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 FAM221AA4D161 298 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 C5orf49A4QMS7 147 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 VSTM5A8MXK1 200 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 COX5BP10606 129 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 LOXP28300 417 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 CALCRP30988 508 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HIST1H3AP68431 136 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 POU4F2Q12837 409 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 ECH1Q13011 328 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 MAD2L1BPQ15013 274 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 SLC25A30Q5SVS4 291 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 C6orf52Q5T4I8 152 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HIST2H3PS2Q5TEC6 136 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 CFAP77Q6ZQR2 320 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HIST2H3AQ71DI3 136 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 TFAP2CQ92754 450 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 COQ7Q99807 217 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 ATF6BQ99941 703 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 RASSF4Q9H2L5 321 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HAO2Q9NYQ3 351 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 TMEM14AQ9Y6G1 99 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
NPLOC4-218ENST00000574964 OR6C6A6NF89 314 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 SYNGR3O43761 229 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 LYNP07948 512 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 SBK2P0C263 348 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 GABRB1P18505 474 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 MTNR1AP48039 350 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 NUDT6P53370 316 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 PCK2Q16822 640 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 KRT80Q6KB66 452 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 ARL9Q6T311 187 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 UNQ6126/PRO20091Q6UXV3 157 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 CDC20BQ86Y33 519 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 SLC35F2Q8IXU6 374 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■■■■□ 24.6
NPLOC4-218ENST00000574964 SPTSSAQ969W0 71 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 RNFT2Q96EX2 444 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 POM121L2Q96KW2 1035 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 COPS4Q9BT78 406 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 ABHD6Q9BV23 337 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 OR51B6Q9H340 312 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 ADGRL4Q9HBW9 690 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 CISD1Q9NZ45 108 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 ATPIF1Q9UII2 106 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 GRIP1Q9Y3R0 1128 aa12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 RPL36Q9Y3U8 105 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-218ENST00000574964 LOC100509620A0A075B734 347 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 SHISA9B4DS77 424 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 PHYHO14832 338 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 APOL3O95236 402 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ABHD16AO95870 558 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 GNAO1P09471 354 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 PSKH1P11801 424 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF35P13682 527 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 SLC15A1P46059 708 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 HCCSP53701 268 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ISL1P61371 349 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 SNTB2Q13425 540 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 KCTD18Q6PI47 426 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 THAP5Q7Z6K1 395 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 OR10H4Q8NGA5 316 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 CNIH3Q8TBE1 160 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 SLC7A6Q92536 515 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 NEUROG1Q92886 237 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 MNTQ99583 582 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 AMBNQ9NP70 447 aa12.56□□□□□ -0.4
NPLOC4-218ENST00000574964 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 F5H5K5 113 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 LCKP06239 509 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 FAM157BP0CG42 384 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 ALOX5APP20292 161 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 NR4A1P22736 598 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 HSD11B1P28845 292 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 RAD52P43351 418 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 TPTEP56180 551 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 RPS23P62266 143 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 HGFACQ04756 655 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF91Q05481 1191 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms