RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 VSIG4Q9Y279 399 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 PLEKHA6Q9Y2H5 1048 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 R4GMQ9 66 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 GON4LQ3T8J9 2241 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 TMED7-TICAM2A0A0A6YYA0 188 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 BCL2L11O43521 198 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 DDAH2O95865 285 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 SLC25A4P12235 298 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 NAT1P18440 290 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 CNR1P21554 472 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 NR0B1P51843 470 aaKnown RBP14.02□□□□□ -0.16
NUP88-207ENST00000573584 ARHGDIBP52566 201 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 SRSF4Q08170 494 aaKnown RBP14.02□□□□□ -0.16
NUP88-207ENST00000573584 ELOCQ15369 112 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 C9orf50Q5SZB4 431 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 CORO6Q6QEF8 472 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 ZNF721Q8TF20 911 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 TGM7Q96PF1 710 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 TMED7Q9Y3B3 224 aa14.02□□□□□ -0.16
NUP88-207ENST00000573584 IGHV5-51A0A0C4DH38 117 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 LOC107986453A0A1B0GWG9 222 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 TMEM200CA6NKL6 621 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 PLATP00750 562 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 BLKP51451 505 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 CAPZA1P52907 286 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 ZP2Q05996 745 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 MEF2DQ14814 521 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 C1orf140Q5VVS0 124 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 TTLL10Q6ZVT0 673 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 TMEM17Q86X19 198 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 KDM8Q8N371 416 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 OR4D6Q8NGJ1 314 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 PRRT1Q99946 306 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 OR52A1Q9UKL2 312 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 MYO9BQ13459 2157 aa14.02□□□□□ -0.17
NUP88-207ENST00000573584 ARID1BQ8NFD5 2236 aaPredicted RBP14.02□□□□□ -0.17
NUP88-207ENST00000573584 EPOPA6NHQ4 379 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 FAM25EA8MYX2 175 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 CRABP1P29762 137 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 DLSTP36957 453 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 POLR2HP52434 150 aaKnown RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 ATP1B3P54709 279 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 GFERP55789 205 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 HYAL1Q12794 435 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 RNASE10Q5GAN6 216 aaKnown RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 HLA-DQA1Q5Y7H0 255 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ACOT7LQ6ZUV0 252 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 BPIFCQ8NFQ6 507 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 NARS2Q96I59 477 aaKnown RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 OR11A1Q9GZK7 315 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 SLCO1B1Q9Y6L6 691 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 OR14I1A6ND48 311 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 A8MVM7 634 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ALG1L2C9J202 215 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 DNASE2O00115 360 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 PLPP3O14495 311 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 LMX1BO60663 402 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ARRB1P49407 418 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 KIAA0895LQ68EN5 471 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 SLC25A42Q86VD7 318 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 GDF2Q9UK05 429 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 CYP8B1Q9UNU6 501 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 TMEM269A0A1B0GVZ9 245 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 RNF222A6NCQ9 220 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 METTL21EPA6NDL7 271 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 SOX1O00570 391 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 NUDT21O43809 227 aaKnown RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 NPIPB7O75200 414 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 SRSF10O75494 262 aaKnown RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 HLA-DOBP13765 273 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ZNF823P16415 610 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ZBTB25P24278 435 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 MC2RQ01718 297 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 PLCXD2Q0VAA5 305 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 PPP1R1AQ13522 171 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 ZNF169Q14929 603 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 VWA2Q5GFL6 755 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 C1orf100Q5SVJ3 147 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.01□□□□□ -0.17
NUP88-207ENST00000573584 PRAMEF17Q5VTA0 474 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 OR2W3Q7Z3T1 314 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 LYG2Q86SG7 212 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 FJX1Q86VR8 437 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 TMEM185AQ8NFB2 350 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 PTX4Q96A99 478 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 CST11Q9H112 138 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 G6PC2Q9NQR9 355 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 MMACHCQ9Y4U1 282 aa14.01□□□□□ -0.17
NUP88-207ENST00000573584 DCNP07585 359 aaKnown RBP14□□□□□ -0.17
NUP88-207ENST00000573584 EBPQ15125 230 aaKnown RBP14□□□□□ -0.17
NUP88-207ENST00000573584 DCXRQ7Z4W1 244 aa14□□□□□ -0.17
NUP88-207ENST00000573584 TRAPPC6BQ86SZ2 158 aa14□□□□□ -0.17
NUP88-207ENST00000573584 CHST4Q8NCG5 386 aa14□□□□□ -0.17
NUP88-207ENST00000573584 AQP3Q92482 292 aa14□□□□□ -0.17
NUP88-207ENST00000573584 CMBLQ96DG6 245 aa14□□□□□ -0.17
NUP88-207ENST00000573584 KLHDC7BQ96G42 594 aa14□□□□□ -0.17
NUP88-207ENST00000573584 LOC390937A0A1W2PQ73 354 aa14□□□□□ -0.17
NUP88-207ENST00000573584 TSPAN2O60636 221 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms