RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 GGTLC2Q14390 218 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TRAM1Q15629 374 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ZIC1Q15915 447 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ACER2Q5QJU3 275 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DCAF10Q5QP82 559 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 OR52E8Q6IFG1 317 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 GTF2H2CQ6P1K8 395 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L9Q6RFH8 374 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 Q6ZNX1 250 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 STOX1Q6ZVD7 989 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM144Q7Z5S9 345 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 OR4N5Q8IXE1 308 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SEMA6DQ8NFY4 1073 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 KCTD4Q8WVF5 259 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 NTNG2Q96CW9 530 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 MED8Q96G25 268 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM89AQ96GI7 184 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM210BQ96KR6 192 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SIGLEC10Q96LC7 697 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF488Q96MN9 340 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 IL17FQ96PD4 163 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 MS4A4EQ96PG1 132 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RCHY1Q96PM5 261 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 UGT2B28Q9BY64 529 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CHIAQ9BZP6 476 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 MEGF9Q9H1U4 602 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF385DQ9H6B1 395 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SIAEQ9HAT2 523 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 PELI2Q9HAT8 420 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ACOT13Q9NPJ3 140 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM30AQ9NV96 361 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM45AQ9NWC5 275 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 GLTPQ9NZD2 209 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 FOXJ2Q9P0K8 574 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4Q9UBX2 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CIDEBQ9UHD4 219 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 KCNG2Q9UJ96 466 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CNTNAP1P78357 1384 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 WDR17Q8IZU2 1322 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SMIM9A6NGZ8 99 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 FCN1O00602 326 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 AZIN1O14977 448 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 NUPL2O15504 423 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 FABP7O15540 132 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ERI3O43414 337 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SUPT3HO75486 399 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 MED6O75586 246 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 PCF11O94913 1555 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CRYZL1O95825 349 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 OXTP01178 125 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 IFNA2P01563 188 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 APOC1P02654 83 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CST2P09228 141 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 OR8U9P0C7N5 309 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF17P17021 662 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ALOX5APP20292 161 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SSTR2P30874 369 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 GCKP35557 465 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TTPAP49638 278 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CDH11P55287 796 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 BLOC1S1P78537 153 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SEMG2Q02383 582 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 BCL2L1Q07817 233 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TRIP13Q15645 432 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ATP6AP1Q15904 470 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CCDC6Q16204 474 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 DEFB115Q30KQ5 88 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 HBMQ6B0K9 141 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 PVRIGQ6DKI7 326 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TRIM40Q6P9F5 258 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM199XQ6PEV8 388 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CASP12Q6UXS9 341 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CYHR1Q6ZMK1 362 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC30A8Q8IWU4 369 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 HSD17B11Q8NBQ5 300 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM161BQ8NDZ6 487 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 OR6F1Q8NGZ6 308 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 RPLP0P6Q8NHW5 317 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TBCKQ8TEA7 893 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM174Q8WUU8 243 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 RCN3Q96D15 328 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SEC22AQ96IW7 307 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 POM121L2Q96KW2 1035 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF681Q96N22 645 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SCGB3A2Q96PL1 93 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 QKIQ96PU8 341 aaKnown RBP eCLIP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 OR5B12Q96R08 314 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 SORT1Q99523 831 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 GPR21Q99679 349 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 HES7Q9BYE0 225 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 NMUR2Q9GZQ4 415 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CSTL1Q9H114 145 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ZBTB20Q9HC78 741 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF446Q9NWS9 450 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 CD84Q9UIB8 345 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 HHLA2Q9UM44 414 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms