RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ZNF404Q494X3 552 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 TNFAIP8L3Q5GJ75 292 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 RUSC1-AS1Q66K80 236 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 FOXL2NBQ6ZUU3 175 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 PTOV1Q86YD1 416 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 FUNDC1Q8IVP5 155 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 C1orf87Q8N0U7 546 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 ATG16L2Q8NAA4 619 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 OR10AD1Q8NGE0 317 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 MOSPD2Q8NHP6 518 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 PFN4Q8NHR9 129 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 ZNF420Q8TAQ5 688 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 HAVCR1Q96D42 359 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 SGTBQ96EQ0 304 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 MEGF10Q96KG7 1140 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 RBP7Q96R05 134 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 CPPED1Q9BRF8 314 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 CDADC1Q9BWV3 514 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 TXNIPQ9H3M7 391 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 CCDC167Q9P0B6 97 aa9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-209ENST00000568569 A0A1W2PPL8 197 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 P2RY10O00398 339 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 GPR137BO60478 399 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 DOK2O60496 412 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 RAC2P15153 192 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 SRP9P49458 86 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 SCRN3Q0VDG4 424 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 ZNF181Q2M3W8 571 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 RUNDC3AQ59EK9 446 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 ALG10Q5BKT4 473 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 WDR25Q64LD2 544 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 OR5AS1Q8N127 324 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 MREGQ8N565 214 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 CLDN22Q8N7P3 220 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 C10orf82Q8WW14 230 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 LIPHQ8WWY8 451 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 GATAD2BQ8WXI9 593 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 PTP4A1Q93096 173 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 PCGF1Q9BSM1 259 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 WACQ9BTA9 647 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 ACOXLQ9NUZ1 547 aa9.82□□□□□ -0.84
GTF3C1-209ENST00000568569 TMEM120BA0PK00 339 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 C5orf63A6NC05 138 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 C22orf46C9J442 243 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 C3orf80F5H4A9 247 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 PIN1P1O15428 100 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 SFTPBP07988 381 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 CFHR2P36980 270 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 ERFP50548 548 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 RPL27P61353 136 aaKnown RBP9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 LAPTM4AQ15012 233 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 EPGNQ6UW88 154 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 DCDC5Q6ZRR9 648 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 VASH1Q7L8A9 365 aaPredicted RBP9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 PATL1Q86TB9 770 aaKnown RBP9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 SLC30A8Q8IWU4 369 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 OR13G1Q8NGZ3 307 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 SLC26A7Q8TE54 656 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 TMEM255BQ8WV15 326 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 TMEM239Q8WW34 195 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 TAMM41Q96BW9 452 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 TRIM15Q9C019 465 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 POLE4Q9NR33 117 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 HIF3AQ9Y2N7 669 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 STARD10Q9Y365 291 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 USH1CQ9Y6N9 552 aa9.81□□□□□ -0.84
GTF3C1-209ENST00000568569 CENPVL3A0A0U1RRI6 287 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 ZNF879B4DU55 563 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 J3QW42 95 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 SGCEO43556 437 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 TOX4O94842 621 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 IGHV4-59P01825 116 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 LIPFP07098 398 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 CSF1P09603 554 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 IRF2P14316 349 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 MMP9P14780 707 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 NPY4RP50391 375 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 TAS2R41P59536 307 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 BEAN1Q3B7T3 259 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 INTS11Q5TA45 600 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 DLEU7Q6UYE1 221 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 GDPGP1Q6ZNW5 385 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 REC114Q7Z4M0 266 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 MOGAT3Q86VF5 341 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 NKAIN4Q8IVV8 208 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 ZSCAN4Q8NAM6 433 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 OR8G5Q8NG78 346 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 RASSF5Q8WWW0 418 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 LRTOMTQ8WZ04 291 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 ZNF582Q96NG8 517 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 MED31Q9Y3C7 131 aa9.8□□□□□ -0.84
GTF3C1-209ENST00000568569 IGHV3-64DA0A0J9YX35 117 aa9.79□□□□□ -0.84
GTF3C1-209ENST00000568569 A6NIZ1 184 aa9.79□□□□□ -0.84
GTF3C1-209ENST00000568569 G3V4G9 280 aa9.79□□□□□ -0.84
GTF3C1-209ENST00000568569 H0YL77 283 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms