RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PTCHD4Q6ZW05 846 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 RFPL4BQ6ZWI9 263 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 ADCK1Q86TW2 530 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 HIPK1Q86Z02 1210 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 HS3ST5Q8IZT8 346 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 YIPF5Q969M3 257 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 NRBF2Q96F24 287 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 MDFIQ99750 246 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 NIPSNAP1Q9BPW8 284 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 OR2J1Q9GZK6 312 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 HINT3Q9NQE9 182 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 VSX1Q9NZR4 365 aaPredicted RBP11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 PDP1Q9P0J1 537 aaPredicted RBP11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 KCNS2Q9ULS6 477 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 POLR1DQ9Y2S0 133 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 C17orf100A8MU93 164 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 BHLHE40O14503 412 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 PPIHO43447 177 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 DOK2O60496 412 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 LILRA1O75019 489 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 NGFP01138 241 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 FCGR1AP12314 374 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF250P15622 560 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 FASP25445 335 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 GIFP27352 417 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 CDKN2AP42771 156 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 HTR5AP47898 357 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 CHN2P52757 468 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 PPP1CBP62140 327 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 KPNB1Q14974 876 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 FAM166AQ6J272 317 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 LEG1Q6P5S2 330 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 SHQ1Q6PI26 577 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 FOXL2NBQ6ZUU3 175 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 OR52L1Q8NGH7 329 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 OR8D4Q8NGM9 314 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 IPCEF1Q8WWN9 437 aaPredicted RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 RDH5Q92781 318 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 BEX2Q9BXY8 128 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 NUAK2Q9H093 628 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 SHARPINQ9H0F6 387 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF275Q9NSD4 429 aaPredicted RBP11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 SLCO1C1Q9NYB5 712 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 GPR160Q9UJ42 338 aa11.65□□□□□ -0.54
VPS9D1-204ENST00000565023 IGLV3-9A0A075B6K5 115 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 SGCEO43556 437 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 SPRY3O43610 288 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 ANXA8P13928 327 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 IGFBP5P24593 272 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 ARHGDIAP52565 204 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 GABPB1Q06547 395 aaPredicted RBP11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 SCRN3Q0VDG4 424 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 MEP1BQ16820 701 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 CLEC12AQ5QGZ9 265 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 AVPI1Q5T686 147 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 JAZF1Q86VZ6 243 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 SLC7A6Q92536 515 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 C4orf45Q96LM5 186 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 RAB3IPQ96QF0 476 aaPredicted RBP11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 FN3KQ9H479 309 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 SRA1Q9HD15 236 aaKnown RBP11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 PLEK2Q9NYT0 353 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 TREM2Q9NZC2 230 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 ASH2LQ9UBL3 628 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 GRIP1Q9Y3R0 1128 aa11.64□□□□□ -0.55
VPS9D1-204ENST00000565023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.558e-7■■■□□ 19.2
VPS9D1-204ENST00000565023 SOX14O95416 240 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 ABHD16AO95870 558 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 RENP00797 406 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 HIST1H1CP16403 213 aaKnown RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 PRKACGP22612 351 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 NOS3P29474 1203 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 ZNF81P51508 661 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 RIN1Q13671 783 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 ZNF362Q5T0B9 420 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 SLC35F1Q5T1Q4 408 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 ZNF771Q7L3S4 317 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 GLB1L2Q8IW92 636 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 LNX2Q8N448 690 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 OR5K1Q8NHB7 308 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 KLF14Q8TD94 323 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 PYDC1Q8WXC3 89 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 LRTOMTQ8WZ04 291 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 MARS2Q96GW9 593 aaKnown RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 NMNAT3Q96T66 252 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 POFUT1Q9H488 388 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 LPAR2Q9HBW0 351 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 DECR2Q9NUI1 292 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 TBC1D23Q9NUY8 699 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms