RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ZNF133P52736 654 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 DLX1P56177 255 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 CTXN1P60606 82 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 POU4F2Q12837 409 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 ZMAT1Q5H9K5 638 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 PRAMEF6Q5VXH4 476 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 SLC30A8Q8IWU4 369 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 C1orf174Q8IYL3 243 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 FGFRL1Q8N441 504 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 FITM2Q8N6M3 262 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 OR13C2Q8NGS9 318 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 TMEM239Q8WW34 195 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 TECTBQ96PL2 329 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 MMADHCQ9H3L0 296 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 TXNIPQ9H3M7 391 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 UFSP2Q9NUQ7 469 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 NKIRAS1Q9NYS0 192 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 IL19Q9UHD0 177 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 RIMS3Q9UJD0 308 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 ADAM18Q9Y3Q7 739 aa9.73□□□□□ -0.85
NSMCE1-202ENST00000561960 A0A1W2PRD5 423 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 A0A1W2PRF3 423 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 A0A1W2PRM7 423 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 FBP2O00757 339 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 MLNRO43193 412 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 IFI30P13284 250 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 MSR1P21757 451 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 LIPAP38571 399 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 RPL27P61353 136 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 SF3A3Q12874 501 aaKnown RBP eCLIP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 NRN1LQ496H8 165 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 GPR157Q5UAW9 335 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 SFRP4Q6FHJ7 346 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 WDR93Q6P2C0 686 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 LRRN1Q6UXK5 716 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 Q6YL49 198 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 C9orf139Q6ZV77 190 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 MUC20Q8N307 709 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 C11orf44Q8N8P7 122 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 DACT3Q96B18 629 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 NEIL1Q96FI4 390 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 MPP4Q96JB8 637 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 TCF7L1Q9HCS4 588 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 POLE4Q9NR33 117 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 TMCC3Q9ULS5 477 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 CORO2BQ9UQ03 480 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 MMP24Q9Y5R2 645 aa9.72□□□□□ -0.85
NSMCE1-202ENST00000561960 A0A0U1RQK1 487 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 J3KTA2 159 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 SGCEO43556 437 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 GPR137BO60478 399 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 KITLGP21583 273 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 SLC9A3P48764 834 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 ELF3P78545 371 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 GUCY1A3Q02108 690 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 NFYCQ13952 458 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 MEP1BQ16820 701 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 RABL3Q5HYI8 236 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 UNQ6126/PRO20091Q6UXV3 157 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 LINC01006Q8NI28 216 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 LHX4Q969G2 390 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 RBP7Q96R05 134 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 TBX15Q96SF7 602 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 CGREF1Q99674 301 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 MAN2C1Q9NTJ4 1040 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 ASH2LQ9UBL3 628 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 CTSZQ9UBR2 303 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 CLN8Q9UBY8 286 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 CGGBP1Q9UFW8 167 aaPredicted RBP9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 IL20RAQ9UHF4 553 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 MED31Q9Y3C7 131 aa9.71□□□□□ -0.86
NSMCE1-202ENST00000561960 CENPVL3A0A0U1RRI6 287 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 KIR2DS1A0A191URI9 304 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 SLC22A31A6NKX4 558 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 C12orf71A8MTZ7 269 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 TIMM23O14925 209 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 RER1O15258 196 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 GUCA1AP43080 201 aaPredicted RBP9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 GPR4P46093 362 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 CENPAP49450 140 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 PCBD1P61457 104 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 MPPED2Q15777 294 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 TAF9Q16594 264 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 LRRC23Q53EV4 343 aaPredicted RBP9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 TTMPQ5BVD1 217 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 WDR25Q64LD2 544 aaPredicted RBP9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 CORO6Q6QEF8 472 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 ARL9Q6T311 187 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 HDDC2Q7Z4H3 204 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 ZER1Q7Z7L7 766 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 LYG1Q8N1E2 194 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 NPEPL1Q8NDH3 523 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms