RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ZNF101Q8IZC7 436 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 GJC3Q8NFK1 279 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 OR10H5Q8NGA6 315 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 PTP4A1Q93096 173 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 PNRC2Q9NPJ4 139 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 USE1Q9NZ43 259 aa13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 SETD2Q9BYW2 2564 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-219ENST00000560871 PLCE1Q9P212 2302 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 TVP23AA6NH52 213 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 EI24O14681 340 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 NDUFS7O75251 213 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 HLA-DQA2P01906 255 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 CCNOP22674 350 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 RPS27P42677 84 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 UCP2P55851 309 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 ATP5J2P56134 94 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 SNRPD2P62316 118 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 PCK2Q16822 640 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 SLX4IPQ5VYV7 408 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 C12orf73Q69YU5 71 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 LINC00346Q8IVM7 164 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 PQLC1Q8N2U9 271 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 DOK1Q99704 481 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 COQ7Q99807 217 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 RBM4BQ9BQ04 359 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 BCL2L14Q9BZR8 327 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 OR51B6Q9H340 312 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 HEATR1Q9H583 2144 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 WDR76Q9H967 626 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 ENOPH1Q9UHY7 261 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
RABGGTA-219ENST00000560871 IGLV3-9A0A075B6K5 115 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 TRIM64A6NGJ6 449 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 TRIM64BA6NI03 449 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PRR23D1E9PI22 279 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PRODHO43272 600 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 GLCEO94923 617 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 ALPLP05186 524 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PRR23D2P0DMB1 279 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 SLC2A5P22732 501 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 FMO3P31513 532 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 POLR2IP36954 125 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 RAD52P43351 418 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PPOXP50336 477 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 KRTAP21-3Q3LHN1 58 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 KRTAP27-1Q3LI81 207 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 TEX30Q5JUR7 227 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 RGS7BPQ6MZT1 257 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 PLBD1Q6P4A8 553 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 LRP11Q86VZ4 500 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 ZNF511Q8NB15 262 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 OR10S1Q8NGN2 331 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 OR1F12Q8NHA8 337 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 MAP6Q96JE9 813 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 MARCH7Q9H992 704 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 MYEF2Q9P2K5 600 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 FZR1Q9UM11 496 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 MTORP42345 2549 aa13.31□□□□□ -0.28
RABGGTA-219ENST00000560871 ANKRD65E5RJM6 399 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 PRKYO43930 277 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 LY6G6DO95868 133 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 HEXAP06865 529 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 DBHP09172 617 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 ZNF250P15622 560 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 ZNF823P16415 610 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 EVX1P49640 407 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 ENTPD1P49961 510 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 ALDH3A2P51648 485 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 BLVRAP53004 296 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 EFNB1P98172 346 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 SNAPC1Q16533 368 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 TMEM255AQ5JRV8 349 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 DNM1P46Q6ZS02 220 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 Q71RC1 249 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 CXXC5Q7LFL8 322 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 TIGD4Q8IY51 512 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 BBS1Q8NFJ9 593 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 OR1J1Q8NGS3 322 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 C4orf45Q96LM5 186 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 SORCS2Q96PQ0 1159 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 TEX12Q9BXU0 123 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 OR51V1Q9H2C8 321 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 TVP23BQ9NYZ1 205 aa13.3□□□□□ -0.28
RABGGTA-219ENST00000560871 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
RABGGTA-219ENST00000560871 VSTM5A8MXK1 200 aa13.29□□□□□ -0.28
RABGGTA-219ENST00000560871 E9PQ18 207 aa13.29□□□□□ -0.28
RABGGTA-219ENST00000560871 M0R129 80 aa13.29□□□□□ -0.28
RABGGTA-219ENST00000560871 SMAD7O15105 426 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms