RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 CD8AP01732 235 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 MT-ND5P03915 603 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 GYPBP06028 91 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 ADRA2AP08913 450 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 SPARCP09486 303 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 PYCR1P32322 319 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 GLRXP35754 106 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 KLF3P57682 345 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-219ENST00000560483 PSG4Q00888 419 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 TEKQ02763 1124 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 HGFACQ04756 655 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 DBPQ10586 325 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-219ENST00000560483 COX10Q12887 443 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 AQP6Q13520 282 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 KPNB1Q14974 876 aaKnown RBP6.9□□□□□ -1.3
LRRC28-219ENST00000560483 ADIPOQQ15848 244 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 C11orf91Q3C1V1 193 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 SLC27A4Q6P1M0 643 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 CORO6Q6QEF8 472 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 SPNS3Q6ZMD2 512 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 TMEM179BQ7Z7N9 219 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 AMIGO2Q86SJ2 522 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 DTX2Q86UW9 622 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 HIPK1Q86Z02 1210 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 ZNF584Q8IVC4 421 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 C10orf67Q8IYJ2 551 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 OR6V1Q8N148 313 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 SLC37A3Q8NCC5 494 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 GJC3Q8NFK1 279 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 OR8D4Q8NGM9 314 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 OR5K1Q8NHB7 308 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 PYDC1Q8WXC3 89 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 STMN2Q93045 179 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 NABP1Q96AH0 204 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 PITX2Q99697 317 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 RHNO1Q9BSD3 238 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 BCL2L14Q9BZR8 327 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 OR51V1Q9H2C8 321 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 TPK1Q9H3S4 243 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 ELOVL3Q9HB03 270 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 PAPOLBQ9NRJ5 636 aaKnown RBP6.9□□□□□ -1.3
LRRC28-219ENST00000560483 KRT84Q9NSB2 600 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 N6AMT1Q9Y5N5 214 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 ORC6Q9Y5N6 252 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 RTTNQ86VV8 2226 aa6.9□□□□□ -1.3
LRRC28-219ENST00000560483 VPS13CQ709C8 3753 aa6.9□□□□□ -1.31
LRRC28-219ENST00000560483 CELSR1Q9NYQ6 3014 aa6.9□□□□□ -1.31
LRRC28-219ENST00000560483 PLSCR5A0PG75 271 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ARRDC5A6NEK1 342 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SAC3D1A6NKF1 404 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 FAM183AA6NL82 134 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 PRR23D1E9PI22 279 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 F5H5K5 113 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 H7C1Q1 480 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 M0R233 179 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 BHLHE40O14503 412 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 RER1O15258 196 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 LY6HO94772 140 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SCG5P05408 212 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 MMP7P09237 267 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 PRR23D2P0DMB1 279 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF35P13682 527 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 OSMP13725 252 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 FMO3P31513 532 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ALDH3B1P43353 468 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SLC6A9P48067 706 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF133P52736 654 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 UCP2P55851 309 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ERVS71-1P61550 626 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 LSM6P62312 80 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 CCNIQ14094 377 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 CRMP1Q14194 572 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ENDOGQ14249 297 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 GINS1Q14691 196 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ATP6AP1Q15904 470 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SNAPC1Q16533 368 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF718Q3SXZ3 478 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF770Q6IQ21 691 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SHQ1Q6PI26 577 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SPATC1Q76KD6 591 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 LURAP1LQ8IV03 231 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ERI1Q8IV48 349 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 ZCCHC24Q8N2G6 241 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 PAQR4Q8N4S7 273 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 OR4Q3Q8NH05 313 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 LRTOMTQ8WZ04 291 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 FAM168AQ92567 244 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 MRPL24Q96A35 216 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 SLCO4A1Q96BD0 722 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 NMD3Q96D46 503 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 C4orf45Q96LM5 186 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 PRRG3Q9BZD7 231 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 MRPL37Q9BZE1 423 aaKnown RBP6.89□□□□□ -1.31
LRRC28-219ENST00000560483 RACGAP1Q9H0H5 632 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 WNT5BQ9H1J7 359 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 CXXC4Q9H2H0 198 aa6.89□□□□□ -1.31
LRRC28-219ENST00000560483 RASSF4Q9H2L5 321 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 518.5 ms