RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RAB4AP20338 218 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 CD40LGP29965 261 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 AQP1P29972 269 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 GPX4P36969 197 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 CSNK1A1P48729 337 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 DLX1P56177 255 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TAS2R60P59551 318 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RAP1BP61224 184 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 VSNL1P62760 191 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 CD47Q08722 323 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TWF1Q12792 350 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ASAH1Q13510 395 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 CLINT1Q14677 625 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TGIF1Q15583 401 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 OR7A5Q15622 319 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ATP6AP1Q15904 470 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 NRF1Q16656 503 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 QRICH1Q2TAL8 776 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TIMM50Q3ZCQ8 353 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ZNF691Q5VV52 312 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 UBE2UQ5VVX9 321 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RWDD4Q6NW29 188 aaKnown RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 C2orf66Q6UXQ4 117 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TMIGD1Q6UXZ0 262 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 UNC93AQ86WB7 457 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 DUSP18Q8NEJ0 188 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 OR10R2Q8NGX6 335 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 NDRG1Q92597 394 aaKnown RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 FAM122AQ96E09 287 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 MED8Q96G25 268 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ZNF514Q96K75 400 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 ZNF396Q96N95 335 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 SERPINB11Q96P15 392 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 CTRCQ99895 268 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 AGMATQ9BSE5 352 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 C1orf198Q9H425 327 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 MIEF1Q9NQG6 463 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RMND1Q9NWS8 449 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 QPCTLQ9NXS2 382 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RBAKQ9NYW8 714 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 VAPAQ9P0L0 249 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 BTNL2Q9UIR0 455 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 KLHL21Q9UJP4 597 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 NXT1Q9UKK6 140 aaKnown RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 PSMD13Q9UNM6 376 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 COL16A1Q07092 1604 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 DENND4AQ7Z401 1863 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RAI1Q7Z5J4 1906 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 MAPK8IP3Q9UPT6 1336 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 BRCA1P38398 1863 aaKnown RBP2.65□□□□□ -1.98
SPG11-218ENST00000559754 A0A0A6YYD5 115 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 A0A0B4J2A0 478 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 C1orf232A0A0U1RR37 186 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ANKRD20A5PA0PJZ0 165 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 TMEM213A2RRL7 107 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 RBMY1BA6NDE4 496 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 RBMY1EA6NEQ0 496 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 C12orf77C9JDV5 145 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 F6UB75 175 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 AGPAT2O15120 278 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 RAD51CO43502 376 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SNAI2O43623 268 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 GATCO43716 136 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 TBL1XO60907 577 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ICOSLGO75144 302 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 LYPLA1O75608 230 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 TRAPPC6AO75865 159 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 VENTXO95231 258 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SNAPINO95295 136 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 BRI3O95415 125 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 LDOC1O95751 146 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 CATP04040 527 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 SEMG1P04279 462 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ARG1P05089 322 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 RBMY1DP0C7P1 496 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 OCMP0CE72 109 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 RBMY1A1P0DJD3 496 aaKnown RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 FOLR1P15328 257 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 LOXP28300 417 aaPredicted RBP2.65□□□□□ -1.99
SPG11-218ENST00000559754 IL2RGP31785 369 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SERPINB5P36952 375 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PRLHRP49683 370 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 RORCP51449 518 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SELENOTP62341 195 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SEMG2Q02383 582 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ACVR1Q04771 509 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ZNF763Q0D2J5 394 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 DGCR6Q14129 220 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 TFDP2Q14188 446 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 ZNF726P1Q15940 193 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 C5orf47Q569G3 176 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PAGE2BQ5JRK9 111 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 C1orf100Q5SVJ3 147 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 TPTE2P1Q5T6R2 138 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 C1orf146Q5VVC0 180 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 DUPD1Q68J44 220 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 FAHD1Q6P587 224 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 CNIH2Q6PI25 160 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 SSX6Q7RTT6 188 aa2.65□□□□□ -1.99
SPG11-218ENST00000559754 PLCZ1Q86YW0 608 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms