RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CCR6P51684 374 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 GALK2Q01415 458 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 FOXF1Q12946 379 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 ST3GAL2Q16842 350 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 PHF19Q5T6S3 580 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMEM164Q5U3C3 297 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 SEZ6L2Q6UXD5 910 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 NHLRC1Q6VVB1 395 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 LRRC69Q6ZNQ3 347 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 C9orf62Q8N4C0 152 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 FADS6Q8N9I5 356 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 DNAAF1Q8NEP3 725 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR2M3Q8NG83 312 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR4K17Q8NGC6 315 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR11H7Q8NGC8 314 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR5D14Q8NGL3 314 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR1J4Q8NGS1 313 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR13C3Q8NGS6 347 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 OR2AJ1Q8NGZ0 328 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 ELP5Q8TE02 316 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A28Q96A46 364 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 ZC3H10Q96K80 434 aaKnown RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 NAA11Q9BSU3 229 aaPredicted RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 BEX2Q9BXY8 128 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMPRSS13Q9BYE2 586 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 CLEC4MQ9H2X3 399 aaPredicted RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 CCDC86Q9H6F5 360 aaKnown RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMEM138Q9NPI0 162 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 MED11Q9P086 117 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 CYB5R1Q9UHQ9 305 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 MGAT4AQ9UM21 535 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 U3KQA8 63 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 IGHV3-20A0A0C4DH32 117 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 CIB4A0PJX0 185 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 GJE1A6NN92 205 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ZNF726A6NNF4 738 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 OR2J2O76002 312 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 OR2A4O95047 310 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 BPNT1O95861 308 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 PNPP00491 289 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 GP1BAP07359 652 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 UBBP0CG47 229 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ZNF17P17021 662 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DNASE1P24855 282 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 CTSSP25774 331 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 BDKRB2P30411 391 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 PTGDSP41222 190 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 BIDP55957 195 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 CLRN1P58418 232 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 GMFBP60983 142 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 LSM6P62312 80 aaKnown RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 MC2RQ01718 297 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DHODHQ02127 395 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 POU3F1Q03052 451 aaPredicted RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 MYBPHQ13203 477 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 CAMK2DQ13557 499 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 MEF2DQ14814 521 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 HIST3H3Q16695 136 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 PCGF3Q3KNV8 242 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ZNF626Q68DY1 528 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 LAMTOR1Q6IAA8 161 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ARSKQ6UWY0 536 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ESPNLQ6ZVH7 1005 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 PGAP1Q75T13 922 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 OR2W3Q7Z3T1 314 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DCXRQ7Z4W1 244 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ADGRE4PQ86SQ3 457 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 IZUMO1Q8IYV9 350 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ARMC10Q8N2F6 343 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 GTPBP8Q8N3Z3 284 aaPredicted RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 SLC22A24Q8N4F4 322 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DTX3Q8N9I9 347 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 SLC38A9Q8NBW4 561 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 UXS1Q8NBZ7 420 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 OR51D1Q8NGF3 324 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 IFI44Q8TCB0 444 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 GPX8Q8TED1 209 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DACT3Q96B18 629 aaPredicted RBP7.42□□□□□ -1.22
SPG11-209ENST00000558253 OR2A7Q96R45 310 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 AMELYQ99218 206 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 KLHDC3Q9BQ90 382 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ATG5Q9H1Y0 275 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 AUNIPQ9H7T9 357 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 ZFP64Q9NPA5 681 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 G6PC2Q9NQR9 355 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 DLL4Q9NR61 685 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 KLK11Q9UBX7 282 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 SLC22A13Q9Y226 551 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 EMC9Q9Y3B6 208 aa7.42□□□□□ -1.22
SPG11-209ENST00000558253 SCN2AQ99250 2005 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TRAV18A0A075B6X5 111 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 TMEM272A0A1B0GTI8 110 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 LOC107986453A0A1B0GWG9 222 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 AQP7P3A6NL99 342 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 B4E171 279 aa7.41□□□□□ -1.22
SPG11-209ENST00000558253 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms