RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FADDQ13158 208 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 FLOT2Q14254 428 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 FAM78AQ5JUQ0 283 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 DEGS2Q6QHC5 323 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 TPRA1Q86W33 373 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PSTKQ8IV42 348 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ERI1Q8IV48 349 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 MICU2Q8IYU8 434 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF683Q8IZ20 524 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 IQCKQ8N0W5 287 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 UBL4BQ8N7F7 174 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CATSPER1Q8NEC5 780 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 DEFB124Q8NES8 71 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 LRRC20Q8TCA0 184 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 SMARCD2Q92925 531 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PELI1Q96FA3 418 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 SH3YL1Q96HL8 342 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PPP1R36Q96LQ0 422 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ZIM3Q96PE6 472 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PANX2Q96RD6 677 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 C12orf57Q99622 126 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 MCHR1Q99705 422 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 C19orf24Q9BVV8 132 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PLA2G2FQ9BZM2 168 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 NXF5Q9H1B4 397 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 NARFLQ9H6Q4 476 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 UFSP2Q9NUQ7 469 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PSMC3IPQ9P2W1 217 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 BAZ2BQ9UIF8 2168 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 MOKQ9UQ07 419 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 VSIG4Q9Y279 399 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ACOT9Q9Y305 439 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 UTP11Q9Y3A2 253 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 SAMHD1Q9Y3Z3 626 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 FLVCR1Q9Y5Y0 555 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 A0A1W2PRG6 482 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 METTL21EPA6NDL7 271 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CCDC160A6NGH7 325 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 LINC00587B1AMM8 73 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 FAM25AB3EWG3 89 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 FAM25CB3EWG5 89 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 FAM25GB3EWG6 89 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 AIM2O14862 343 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CASC3O15234 703 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 NUPL2O15504 423 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 RRP8O43159 456 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 B4GALT5O43286 388 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 GMDSO60547 372 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 RAB3DO95716 219 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF806P0C7X5 589 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TCN1P20061 433 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 VDAC1P21796 283 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 GLRA2P23416 452 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 LAP3P28838 519 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 SERPINB1P30740 379 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 RPL5P46777 297 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CASP4P49662 377 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 C21orf59P57076 290 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 EIF3EP60228 445 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 MRPS11P82912 194 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CDK16Q00536 496 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 FLI1Q01543 452 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 SPIBQ01892 262 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 LIPEQ05469 1076 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF829Q3KNS6 432 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 YIF1BQ5BJH7 314 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CDKL4Q5MAI5 379 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CENPPQ6IPU0 288 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 C5orf46Q6UWT4 87 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 RTL4Q6ZR62 310 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 C16orf62Q7Z3J2 963 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TAC4Q86UU9 113 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TMEM123Q8N131 208 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 SYT14Q8NB59 555 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 STEAP2Q8NFT2 490 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TSTD1Q8NFU3 115 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZPLD1Q8TCW7 415 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 PDCD6IPQ8WUM4 868 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 RLN3Q8WXF3 142 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CLDN23Q96B33 292 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 HAVCR1Q96D42 359 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 SLC25A38Q96DW6 304 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TCEAL4Q96EI5 215 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF641Q96N77 438 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF184Q99676 751 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 BBS2Q9BXC9 721 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 OR51V1Q9H2C8 321 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 MCCC2Q9HCC0 563 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 MRPS30Q9NP92 439 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 SLC17A5Q9NRA2 495 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 TNFRSF19Q9NS68 423 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 C19orf12Q9NSK7 152 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 APOBEC3BQ9UH17 382 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 MAB21L2Q9Y586 359 aa3.39□□□□□ -1.87
PRPF39-212ENST00000557477 MAP1BP46821 2468 aaKnown RBP3.39□□□□□ -1.87
PRPF39-212ENST00000557477 CEP250Q9BV73 2442 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms