RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ABHD5Q8WTS1 349 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 DYDC1Q8WWB3 177 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 TIMD4Q96H15 378 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 TEX37Q96LM6 180 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF48Q96MX3 618 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 GAL3ST1Q99999 423 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 EMC6Q9BV81 110 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SLC5A7Q9GZV3 580 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SLITRK2Q9H156 845 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 OR51B6Q9H340 312 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 DENND2DQ9H6A0 471 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SAP30LQ9HAJ7 183 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM165Q9HC07 324 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 C19orf73Q9NVV2 129 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 FBLN5Q9UBX5 448 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 BTNL2Q9UIR0 455 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 PRELID1Q9Y255 219 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF443Q9Y2A4 671 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 POFUT2Q9Y2G5 429 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 IGKV1D-42A0A075B6H8 117 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PPIAL4EA0A075B759 164 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PPIAL4CA0A0B4J2A2 164 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 LOC102725191A0A1B0GVB3 256 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 ISPDA4D126 451 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 E9PBE3 544 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PPIAL4DF5H284 164 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 MS4A18H0YCH9 400 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 CLDN34H7C241 214 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SPAG7O75391 227 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 UBL3O95164 117 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SERPINA5P05154 406 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 BCHEP06276 602 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 OR8G3PP0DMU2 310 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PPIAL4FP0DN26 164 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 CCL2P13500 99 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 MAKP20794 623 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 OMGP23515 440 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 IL12AP29459 219 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 S100A3P33764 101 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 CAPZA1P52907 286 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 MVDP53602 400 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 NME5P56597 212 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SELENOVP59797 346 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 LARS2Q15031 903 aaKnown RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC9A3R2Q15599 337 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 HFEQ30201 348 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 MS4A18Q3C1V0 323 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PLA1AQ53H76 456 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 ETFRF1Q6IPR1 90 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 C6orf89Q6UWU4 347 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 NHLRC1Q6VVB1 395 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF621Q6ZSS3 439 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 UEVLDQ8IX04 471 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SKA3Q8IX90 412 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 IFT20Q8IY31 132 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 TRIML2Q8N7C3 387 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SYT14Q8NB59 555 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 ADPRHL1Q8NDY3 354 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC30A7Q8NEW0 376 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 OR6N1Q8NGY5 312 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SYNPRQ8TBG9 265 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SUN5Q8TC36 379 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 TCP10LQ8TDR4 215 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 CCL17Q92583 94 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 RAB1CQ92928 201 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 POP5Q969H6 163 aaKnown RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC38A4Q969I6 547 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC35B4Q969S0 331 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC25A28Q96A46 364 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC41A3Q96GZ6 507 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PGAM5Q96HS1 289 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 TXNDC15Q96J42 360 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 LRR1Q96L50 414 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PANX1Q96RD7 426 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 GPA33Q99795 319 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PKP2Q99959 881 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 RHOXF2Q9BQY4 288 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 ULBP2Q9BZM5 246 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 B3GAT2Q9NPZ5 323 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 MMP26Q9NRE1 261 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLC6A13Q9NSD5 602 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SLCO1C1Q9NYB5 712 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PLEK2Q9NYT0 353 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PDP1Q9P0J1 537 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 KLHL14Q9P2G3 628 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 P2RX2Q9UBL9 471 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 GPR160Q9UJ42 338 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 LEF1Q9UJU2 399 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 PURGQ9UJV8 347 aaKnown RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 FBXL3Q9UKT7 428 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 NUP50Q9UKX7 468 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 CAB39Q9Y376 341 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-207ENST00000557470 AUP1Q9Y679 476 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 SESN1Q9Y6P5 492 aa4.94□□□□□ -1.62
VPS33B-207ENST00000557470 TRAV36DV7A0A075B6V5 113 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 A0A087WUJ7 227 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 A0A1B0GWA3 101 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SLC22A23A1A5C7 686 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 DHHO43323 396 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ITM2AO43736 263 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms