RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 NANOGNBQ7Z5D8 188 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 ARMC8Q8IUR7 673 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 OR5AS1Q8N127 324 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 ATG16L2Q8NAA4 619 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 GATAD2BQ8WXI9 593 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 PTP4A1Q93096 173 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 WDFY2Q96P53 400 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.37□□□□□ -0.75
PSEN1-221ENST00000557293 INIPQ9NRY2 104 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 CTSZQ9UBR2 303 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 SLC7A7Q9UM01 511 aa10.37□□□□□ -0.75
PSEN1-221ENST00000557293 A0A1B0GWJ7 208 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 TRAPPC13A5PLN9 417 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 MCIDASD6RGH6 385 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 MLNRO43193 412 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
PSEN1-221ENST00000557293 ABHD16AO95870 558 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 UMPSP11172 480 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 RAC2P15153 192 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 FUT4P22083 530 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 SLC6A2P23975 617 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 PAGE3Q5JUK9 113 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 GDPGP1Q6ZNW5 385 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 DCDC5Q6ZRR9 648 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 PTOV1Q86YD1 416 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 FUNDC1Q8IVP5 155 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 NPEPL1Q8NDH3 523 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 C19orf18Q8NEA5 215 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 OR8G5Q8NG78 346 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 OR10AD1Q8NGE0 317 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 LIPHQ8WWY8 451 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 PPP1R14AQ96A00 147 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 MPP4Q96JB8 637 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 OR52B2Q96RD2 323 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 TRIM15Q9C019 465 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 AURKAIP1Q9NWT8 199 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-221ENST00000557293 VAPAQ9P0L0 249 aa10.36□□□□□ -0.75
PSEN1-221ENST00000557293 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 NPIPB13A6NJU9 1138 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 TRPC5OSA6NMA1 111 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 NPIPB4C9JG80 1138 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 F5H5P2 479 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 M0QX08 132 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SERPINB7O75635 380 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 OR7A10O76100 309 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 OPN1SWP03999 348 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 CD247P20963 164 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 DAP3P51398 398 aaKnown RBP10.35□□□□□ -0.75
PSEN1-221ENST00000557293 PCBD1P61457 104 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 CD47Q08722 323 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SLC35E4Q6ICL7 350 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 OR2T2Q6IF00 324 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 ARL9Q6T311 187 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 NLRC3Q7RTR2 1065 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 NKAIN4Q8IVV8 208 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 GOLGA6L1Q8N7Z2 621 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 PFN4Q8NHR9 129 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 CFHR4Q92496 578 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SLC7A6Q92536 515 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 ANP32BQ92688 251 aaKnown RBP10.35□□□□□ -0.75
PSEN1-221ENST00000557293 LHX4Q969G2 390 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 MAGEB18Q96M61 343 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 TMEM109Q9BVC6 243 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 TXNIPQ9H3M7 391 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SSU72Q9NP77 194 aaKnown RBP10.35□□□□□ -0.75
PSEN1-221ENST00000557293 C20orf141Q9NUB4 165 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 FBLN5Q9UBX5 448 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SLC13A4Q9UKG4 626 aa10.35□□□□□ -0.75
PSEN1-221ENST00000557293 NDRG4Q9ULP0 352 aaKnown RBP10.35□□□□□ -0.75
PSEN1-221ENST00000557293 SNNO75324 88 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-221ENST00000557293 MT-ND1P03886 318 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 LIPFP07098 398 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 KITP10721 976 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 GATA4P43694 442 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 SRP9P49458 86 aaKnown RBP10.34□□□□□ -0.75
PSEN1-221ENST00000557293 GUCY1A3Q02108 690 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 MAB21L1Q13394 359 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 HERPUD1Q15011 391 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 CLEC12AQ5QGZ9 265 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 C11orf87Q6NUJ2 197 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 FBXW12Q6X9E4 464 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 HDDC2Q7Z4H3 204 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 LRRC75AQ8NAA5 344 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 OR13G1Q8NGZ3 307 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.34□□□□□ -0.75
PSEN1-221ENST00000557293 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 ALG12Q9BV10 488 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 RASSF4Q9H2L5 321 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 EMC7Q9NPA0 242 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 POLE4Q9NR33 117 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
PSEN1-221ENST00000557293 UBDO15205 165 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 MSR1P21757 451 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 ARF6P62330 175 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms