RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 ARMCX4Q5H9R4 360 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 MTX3Q5HYI7 312 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 FAM205BPQ63HN1 556 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 SLC25A47Q6Q0C1 308 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 FOXL2NBQ6ZUU3 175 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 C9orf139Q6ZV77 190 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 DHDDSQ86SQ9 333 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 RBM45Q8IUH3 476 aaKnown RBP7.3□□□□□ -1.24
VRK1-206ENST00000557222 ZNF101Q8IZC7 436 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 SIGLECL1Q8N7X8 197 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 NPEPL1Q8NDH3 523 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 OR4D11Q8NGI4 311 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 SLC25A40Q8TBP6 338 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 SLC26A7Q8TE54 656 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
VRK1-206ENST00000557222 SLC25A28Q96A46 364 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 SGTBQ96EQ0 304 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 C4orf45Q96LM5 186 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 COG8Q96MW5 612 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 EBF4Q9BQW3 602 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 OR2H1Q9GZK4 316 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 OR2J1Q9GZK6 312 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 NANOGQ9H9S0 305 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 PATZ1Q9HBE1 687 aaKnown RBP7.3□□□□□ -1.24
VRK1-206ENST00000557222 TMBIM4Q9HC24 238 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 TMEM106BQ9NUM4 274 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 TBCCD1Q9NVR7 557 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 IL20RAQ9UHF4 553 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 BAG5Q9UL15 447 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 NDRG4Q9ULP0 352 aaKnown RBP7.3□□□□□ -1.24
VRK1-206ENST00000557222 NDUFAF1Q9Y375 327 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 PPIAL4AQ9Y536 164 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 INSIG2Q9Y5U4 225 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
VRK1-206ENST00000557222 TANC2Q9HCD6 1990 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 A0A1B0GUS0 222 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 C12orf71A8MTZ7 269 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 KPNA4O00629 521 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 AHCYL1O43865 530 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 SLC2A10O95528 541 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 FSTL3O95633 263 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 OPN1SWP03999 348 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 SBK2P0C263 348 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 GSTM3P21266 225 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 KITLGP21583 273 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 CDAP32320 146 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 AQP2P41181 271 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 MTNR1AP48039 350 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 TNFAIP6P98066 277 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 PAX8Q06710 450 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 BAMBIQ13145 260 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 SGCAQ16586 387 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 PDLIM3Q53GG5 364 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 MUC20Q8N307 709 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 VANGL1Q8TAA9 524 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 LRRC8CQ8TDW0 803 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 TMEM239Q8WW34 195 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 HDAC2Q92769 488 aaKnown RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 TAMM41Q96BW9 452 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 MAGEB18Q96M61 343 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 SH3GL1Q99961 368 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 MRI1Q9BV20 369 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 WNT5BQ9H1J7 359 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 UBAP1Q9NZ09 502 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 ZNF69Q9UC07 566 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.29□□□□□ -1.24
VRK1-206ENST00000557222 IL19Q9UHD0 177 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 MED31Q9Y3C7 131 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 MMP24Q9Y5R2 645 aa7.29□□□□□ -1.24
VRK1-206ENST00000557222 V9GYY5 206 aaPredicted RBP7.29□□□□□ -1.24
VRK1-206ENST00000557222 DOCK11Q5JSL3 2073 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 DNAJC9-AS1A6NH13 148 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 A6NIZ1 184 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 TRAPPC2LH3BP13 241 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 ANGPT2O15123 496 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 TIMM8AO60220 97 aaPredicted RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 IFNA14P01570 189 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 MDH2P40926 338 aaKnown RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 GZMMP51124 257 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 MTPNP58546 118 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 TAS2R41P59536 307 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 BPIFB3P59826 476 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 RAP1BP61224 184 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 RPL27P61353 136 aaKnown RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 BTG1P62324 171 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 RAP1AP62834 184 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 CD47Q08722 323 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 PSG7Q13046 419 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 VMACQ2NL98 169 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 ESCO2Q56NI9 601 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 ALG10Q5BKT4 473 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 TMEM255AQ5JRV8 349 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 KLF17Q5JT82 389 aaPredicted RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 SPATA46Q5T0L3 261 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 AGBL2Q5U5Z8 902 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms