RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLC25A4P12235 298 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 HLA-DOBP13765 273 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 IGFBP3P17936 291 aaPredicted RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 ZBTB25P24278 435 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 AKT2P31751 481 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 CASRP41180 1078 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 RPL27P61353 136 aaKnown RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 ELOCQ15369 112 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 GUCA2BQ16661 112 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 PABPC1L2AQ5JQF8 200 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 TMEM92Q6UXU6 159 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 TRAPPC6BQ86SZ2 158 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 NUDCD2Q8WVJ2 157 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 ASB17Q8WXJ9 295 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 ASB13Q8WXK3 278 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 EDAQ92838 391 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 TSNAXQ99598 290 aaKnown RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 EDEM2Q9BV94 578 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 NUDT9Q9BW91 350 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 OR11A1Q9GZK7 315 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 GAREM1Q9H706 876 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 MBD2Q9UBB5 411 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 RP1P56715 2156 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 IGLV1-36A0A0B4J1U3 117 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 C9orf170A2RU37 121 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 OR14I1A6ND48 311 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 OR2AT4A6NND4 320 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 SULT2B1O00204 365 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 FADS1O60427 444 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 CD74P04233 296 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 ERCC1P07992 297 aaPredicted RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 CTSEP14091 401 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 CD96P40200 585 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 SRSF3P84103 164 aaKnown RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 ZP2Q05996 745 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 CCINQ13939 588 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 ZNF345Q14585 488 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 RNASE10Q5GAN6 216 aaKnown RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 KCTD18Q6PI47 426 aaPredicted RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 LYG2Q86SG7 212 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 PUSL1Q8N0Z8 303 aaKnown RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 PAQR8Q8TEZ7 354 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 TSLPQ969D9 159 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 ZNF587Q96SQ5 575 aaPredicted RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 SCPEP1Q9HB40 452 aa10.21□□□□□ -0.77
SRP54-213ENST00000556994 PURGQ9UJV8 347 aaKnown RBP10.21□□□□□ -0.77
SRP54-213ENST00000556994 TRAV36DV7A0A075B6V5 113 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 KIR2DS5A0A0G2JLQ3 304 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 A0A0G2JNG1 304 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 CPED1A4D0V7 1026 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 HSPB2A8KAH6 182 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 KIR2DS3K7RE56 304 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 P2RY10O00398 339 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 EIF1AYO14602 144 aaKnown RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 LDLRAD4O15165 306 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 NSA2O95478 260 aaKnown RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 ADCYAP1P18509 176 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 IL11P20809 199 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 RPL35P42766 123 aaKnown RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 PRKXP51817 358 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 AKR1D1P51857 326 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 HSD17B7P56937 341 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 FMODQ06828 376 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 KIR2DS5Q14953 304 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 INPP5JQ15735 1006 aaPredicted RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 HSPB2Q16082 182 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 RAB12Q6IQ22 244 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 SLC25A42Q86VD7 318 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 CBLN2Q8IUK8 224 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 FAM219AQ8IW50 185 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 INO80EQ8NBZ0 244 aaPredicted RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 ZNF519Q8TB69 540 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 THAP6Q8TBB0 222 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 CYYR1Q96J86 154 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 S1PR5Q9H228 398 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 GDF2Q9UK05 429 aaPredicted RBP10.21□□□□□ -0.78
SRP54-213ENST00000556994 PRELID3BQ9Y3B1 194 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 SLCO1B1Q9Y6L6 691 aa10.21□□□□□ -0.78
SRP54-213ENST00000556994 TMEM218A2RU14 115 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 C5orf51A6NDU8 294 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 SOX1O00570 391 aaPredicted RBP10.2□□□□□ -0.78
SRP54-213ENST00000556994 ABCD4O14678 606 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 SIGLEC6O43699 453 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 PGAM2P15259 253 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 HRH1P35367 487 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 PPICP45877 212 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 OR1D4P47884 311 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 YPEL5P62699 121 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 ROM1Q03395 351 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 TOMM20Q15388 145 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 STK11Q15831 433 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 TMEM71Q6P5X7 295 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 TMPPEQ6ZT21 453 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 MAMDC2Q7Z304 686 aaPredicted RBP10.2□□□□□ -0.78
SRP54-213ENST00000556994 LDLRAD3Q86YD5 345 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 TMEM151BQ8IW70 566 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.2□□□□□ -0.78
SRP54-213ENST00000556994 THRSPQ92748 146 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms