RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
HNRNPC-227ENST00000556897 USH1CQ9Y6N9 552 aa7.53□□□□□ -1.2
HNRNPC-227ENST00000556897 NBEAL2Q6ZNJ1 2754 aa7.53□□□□□ -1.2
HNRNPC-227ENST00000556897 NPIPB13A6NJU9 1138 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 SLC22A31A6NKX4 558 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 C12orf71A8MTZ7 269 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 NPIPB4C9JG80 1138 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 POLR3GO15318 223 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 DOK2O60496 412 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 SFTPBP07988 381 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 VIMP08670 466 aaKnown RBP7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 MSR1P21757 451 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 TUBG1P23258 451 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 GUCA1AP43080 201 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 HTR5AP47898 357 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 PITPNBP48739 271 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 MTPNP58546 118 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 GUCY1A3Q02108 690 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 SELPLGQ14242 412 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 HLXQ14774 488 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 FBLN7Q53RD9 439 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 ALG10Q5BKT4 473 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 FAM201AQ5SY85 155 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 C1orf94Q6P1W5 598 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 WDR93Q6P2C0 686 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 ZNF620Q6ZNG0 422 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 TMEM86BQ8N661 226 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 FITM2Q8N6M3 262 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 OR8B3Q8NGG8 313 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 LINC01006Q8NI28 216 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 SLC7A6Q92536 515 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 HAVCR1Q96D42 359 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 TMEM246Q9BRR3 403 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 PCGF1Q9BSM1 259 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 CDADC1Q9BWV3 514 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 TCF7L1Q9HCS4 588 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 EMC7Q9NPA0 242 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 TUBG2Q9NRH3 451 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 ASH2LQ9UBL3 628 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 STARD10Q9Y365 291 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 NOTCH3Q9UM47 2321 aa7.52□□□□□ -1.21
HNRNPC-227ENST00000556897 C22orf46C9J442 243 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 IFNL4K9M1U5 179 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TNFRSF13BO14836 293 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SHOX2O60902 331 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 ERLIN1O75477 346 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 CLPXO76031 633 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 ALX3O95076 343 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SCG5P05408 212 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TSPAN19P0C672 248 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TNFRSF1BP20333 461 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 RBM34P42696 430 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 CRYBA2P53672 197 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 PROK1P58294 105 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TAS2R41P59536 307 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 BPIFB3P59826 476 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 RPL27P61353 136 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SCRN3Q0VDG4 424 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 ZNF404Q494X3 552 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 AGKQ53H12 422 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TTMPQ5BVD1 217 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 WDR25Q64LD2 544 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 LYPD2Q6UXB3 125 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 FOXL2NBQ6ZUU3 175 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 VASH1Q7L8A9 365 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SYT9Q86SS6 491 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 PATL1Q86TB9 770 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 IGFN1Q86VF2 1251 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 MOGAT3Q86VF5 341 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SLC30A8Q8IWU4 369 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SLC26A7Q8TE54 656 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 C10orf82Q8WW14 230 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 TMEM239Q8WW34 195 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SSMEM1Q8WWF3 244 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 LIPHQ8WWY8 451 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 DYRK2Q92630 601 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 FAM71F1Q96KD3 344 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 MEGF10Q96KG7 1140 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 EBF4Q9BQW3 602 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 POLE4Q9NR33 117 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 CLN8Q9UBY8 286 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 SH3GLB1Q9Y371 365 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 POMT1Q9Y6A1 747 aa7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 V9GYY5 206 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-227ENST00000556897 CENPVL3A0A0U1RRI6 287 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 LRRC30A6NM36 301 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 F5H5P2 479 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 H0YL77 283 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 H7C1C5 153 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 SGCEO43556 437 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 ENSAO43768 121 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 PIP5K1CO60331 668 aa7.5□□□□□ -1.21
HNRNPC-227ENST00000556897 GPR137BO60478 399 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms