RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MAGEA4P43358 317 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 RFX3P48380 749 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 EMDP50402 254 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 SERPINB8P50452 374 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 GPX6P59796 221 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 GNG11P61952 73 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 C17orf67Q0P5P2 114 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 STX5Q13190 355 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 VPS26BQ4G0F5 336 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 TCHHL1Q5QJ38 904 aaPredicted RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 DHRS11Q6UWP2 260 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 TIGD4Q8IY51 512 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 FAM9CQ8IZT9 166 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 METTL4Q8N3J2 472 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 MMGT1Q8N4V1 131 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 OR52B6Q8NGF0 335 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 OR5T2Q8NGG2 359 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF675Q8TD23 568 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 SLC26A7Q8TE54 656 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 KCTD4Q8WVF5 259 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 GTF3AQ92664 365 aaKnown RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 CORO2AQ92828 525 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 EXOSC8Q96B26 276 aaKnown RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 EFHD2Q96C19 240 aaPredicted RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 MUCL1Q96DR8 90 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 NTMT1Q9BV86 223 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 BEX2Q9BXY8 128 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF717Q9BY31 904 aaPredicted RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 REG4Q9BYZ8 158 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ACTR6Q9GZN1 396 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 RAB17Q9H0T7 212 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 DPH5Q9H2P9 285 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 DSN1Q9H410 356 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 FAM120CQ9NX05 1096 aaKnown RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 MED11Q9P086 117 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 VPS29Q9UBQ0 182 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF639Q9UID6 485 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF337Q9Y3M9 751 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 RNF115Q9Y4L5 304 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 NIPBLQ6KC79 2804 aaeCLIP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 SNRNP200O75643 2136 aaKnown RBP4.12□□□□□ -1.75
HIF1A-209ENST00000556827 MTORP42345 2549 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ITPR3Q14573 2671 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SCN2AQ99250 2005 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SCN3AQ9NY46 2000 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 A0A087WZY1 265 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 G3V2L1 256 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SLC1A7O00341 560 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SOCS3O14543 225 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 OR7A17O14581 309 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CD5LO43866 347 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SIX3O95343 332 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-209ENST00000556827 YES1P07947 543 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 ANXA4P09525 319 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CT45A8P0DMV1 189 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CT45A9P0DMV2 189 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 TAC1P20366 129 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 HMOX2P30519 316 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 NTSP30990 170 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PTGDSP41222 190 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PLTPP55058 493 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CARD18P57730 90 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 DHODHQ02127 395 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 NRF1Q16656 503 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SNAI3Q3KNW1 292 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 GGTA1PQ4G0N0 100 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SPIN4Q56A73 249 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CT45A2Q5DJT8 189 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 FGD3Q5JSP0 725 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 TEX35Q5T0J7 233 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 LGSNQ5TDP6 509 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 FAAP20Q6NZ36 180 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PET117Q6UWS5 81 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 STAC2Q6ZMT1 411 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 SSX8Q7RTT4 187 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 HIPK1Q86Z02 1210 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PRSS35Q8N3Z0 413 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CEP112Q8N8E3 955 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 UXS1Q8NBZ7 420 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CDC26Q8NHZ8 85 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 TM4SF18Q96CE8 201 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 NAPGQ99747 312 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-209ENST00000556827 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 TSPYL1Q9H0U9 437 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 FOLH1BQ9HBA9 442 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 MIEF1Q9NQG6 463 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 MRGBPQ9NV56 204 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 DDX18Q9NVP1 670 aaKnown RBP4.11□□□□□ -1.75
HIF1A-209ENST00000556827 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 CES1P1Q9UKY3 287 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 LIPT1Q9Y234 373 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 STK38LQ9Y2H1 464 aa4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PRRC2AP48634 2157 aaKnown RBP4.11□□□□□ -1.75
HIF1A-209ENST00000556827 PCNX1Q96RV3 2341 aa4.1□□□□□ -1.75
HIF1A-209ENST00000556827 H0YC42 278 aa4.1□□□□□ -1.75
HIF1A-209ENST00000556827 H3BNH8 94 aa4.1□□□□□ -1.75
HIF1A-209ENST00000556827 SURF4O15260 269 aa4.1□□□□□ -1.75
HIF1A-209ENST00000556827 MLNRO43193 412 aa4.1□□□□□ -1.75
HIF1A-209ENST00000556827 GMFGO60234 142 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms