RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 LHFPL3Q86UP9 236 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 PQLC3Q8N755 202 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 GATSQ8NAP1 163 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 TMEM104Q8NE00 496 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 OR4C5Q8NGB2 326 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 OR4A15Q8NGL6 344 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 SETD7Q8WTS6 366 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 CACNG8Q8WXS5 425 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 GTF2H4Q92759 462 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 MYDGFQ969H8 173 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 CERS2Q96G23 380 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 C4orf36Q96KX1 117 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 OMDQ99983 421 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 NDUFAF3Q9BU61 184 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 RACGAP1Q9H0H5 632 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ZBP1Q9H171 429 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ZSCAN16Q9H4T2 348 aaPredicted RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 CAB39LQ9H9S4 337 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ASCL3Q9NQ33 180 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 YAE1D1Q9NRH1 226 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 TAS2R16Q9NYV7 291 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 IFNKQ9P0W0 207 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 STOX2Q9P2F5 926 aaPredicted RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 BCAP29Q9UHQ4 241 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ENOPH1Q9UHY7 261 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 PURGQ9UJV8 347 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 IKZF3Q9UKT9 509 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 RASD1Q9Y272 281 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 NPTNQ9Y639 398 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 PCDH15Q96QU1 1955 aa2.59□□□□□ -2
SRP54-209ENST00000555746 PRRC2AP48634 2157 aaKnown RBP2.59□□□□□ -2
SRP54-209ENST00000555746 NAV1Q8NEY1 1877 aa2.58□□□□□ -2
SRP54-209ENST00000555746 POLEQ07864 2286 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PTPRDP23468 1912 aa2.58□□□□□ -2
SRP54-209ENST00000555746 DLG5Q8TDM6 1919 aa2.58□□□□□ -2
SRP54-209ENST00000555746 MGAM2Q2M2H8 2515 aa2.58□□□□□ -2
SRP54-209ENST00000555746 TRAV26-1A0A087WT03 109 aa2.58□□□□□ -2
SRP54-209ENST00000555746 A0A087WWV3 80 aa2.58□□□□□ -2
SRP54-209ENST00000555746 A0A1B0GW15 77 aa2.58□□□□□ -2
SRP54-209ENST00000555746 A0A1W2PQ67 120 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ESYT2A0FGR8 921 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ZNF840PA6NDX5 716 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ANKRD30BLA7E2S9 258 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SERPINE3A8MV23 424 aa2.58□□□□□ -2
SRP54-209ENST00000555746 A8MX80 341 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ZNF487B1APH4 448 aa2.58□□□□□ -2
SRP54-209ENST00000555746 K7ENP7 123 aa2.58□□□□□ -2
SRP54-209ENST00000555746 FOXE1O00358 373 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 SLC9A3R1O14745 358 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 ARPC3O15145 178 aa2.58□□□□□ -2
SRP54-209ENST00000555746 EIF3HO15372 352 aaKnown RBP eCLIP2.58□□□□□ -2
SRP54-209ENST00000555746 STX7O15400 261 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 PHF1O43189 567 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 ZNF354AO60765 605 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 SDC3O75056 442 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SRSF10O75494 262 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 TOXO94900 526 aa2.58□□□□□ -2
SRP54-209ENST00000555746 NUDT14O95848 222 aa2.58□□□□□ -2
SRP54-209ENST00000555746 GOT2P00505 430 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 IGHV3-9P01782 118 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PIGRP01833 764 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ERCC1P07992 297 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 GSTA1P08263 222 aa2.58□□□□□ -2
SRP54-209ENST00000555746 RRASP10301 218 aa2.58□□□□□ -2
SRP54-209ENST00000555746 DBTP11182 482 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 HSD17B1P14061 328 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CBR1P16152 277 aa2.58□□□□□ -2
SRP54-209ENST00000555746 GSTM3P21266 225 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CNR1P21554 472 aa2.58□□□□□ -2
SRP54-209ENST00000555746 DTYMKP23919 212 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CMA1P23946 247 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ADRA1AP35348 466 aa2.58□□□□□ -2
SRP54-209ENST00000555746 P2RY2P41231 377 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SLC1A1P43005 524 aa2.58□□□□□ -2
SRP54-209ENST00000555746 MAGEA6P43360 314 aa2.58□□□□□ -2
SRP54-209ENST00000555746 RPL34P49207 117 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 TGM4P49221 684 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ARRB1P49407 418 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 NUP107P57740 925 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CXCR4P61073 352 aa2.58□□□□□ -2
SRP54-209ENST00000555746 NAAAQ02083 359 aa2.58□□□□□ -2
SRP54-209ENST00000555746 C2orf54Q08AI8 447 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PEX6Q13608 980 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SELPLGQ14242 412 aa2.58□□□□□ -2
SRP54-209ENST00000555746 VAMP3Q15836 100 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PSG3Q16557 428 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ZNF699Q32M78 642 aa2.58□□□□□ -2
SRP54-209ENST00000555746 C18orf21Q32NC0 220 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 NDUFAF6Q330K2 333 aa2.58□□□□□ -2
SRP54-209ENST00000555746 LINC00303Q3SY05 128 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ACTBL2Q562R1 376 aa2.58□□□□□ -2
SRP54-209ENST00000555746 LCE1EQ5T753 118 aa2.58□□□□□ -2
SRP54-209ENST00000555746 FHL5Q5TD97 284 aa2.58□□□□□ -2
SRP54-209ENST00000555746 LGSNQ5TDP6 509 aa2.58□□□□□ -2
SRP54-209ENST00000555746 METTL21CQ5VZV1 264 aa2.58□□□□□ -2
SRP54-209ENST00000555746 TTC23Q5W5X9 447 aa2.58□□□□□ -2
SRP54-209ENST00000555746 FAM219BQ5XKK7 198 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SPINK14Q6IE38 97 aa2.58□□□□□ -2
SRP54-209ENST00000555746 IDO2Q6ZQW0 420 aa2.58□□□□□ -2
SRP54-209ENST00000555746 LRRC74BQ6ZQY2 392 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms