RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TMCC2O75069 709 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 PTHP01270 115 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 HLA-DQA2P01906 255 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 LCKP06239 509 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 MPV17P39210 176 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SLC25A1P53007 311 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 CRISP1P54107 249 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 GLO1Q04760 184 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 KDM4DQ6B0I6 523 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 PLBD1Q6P4A8 553 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 TMEM154Q6P9G4 183 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 DNM1P46Q6ZS02 220 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 HIPK1Q86Z02 1210 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 OR1J2Q8NGS2 313 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 OR2T4Q8NH00 348 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 OR1F12Q8NHA8 337 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 TRMT61AQ96FX7 289 aaKnown RBP10.6□□□□□ -0.71
SYNE2-214ENST00000554928 CENPNQ96H22 339 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SMR3AQ99954 134 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 BDH2Q9BUT1 245 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 C1orf198Q9H425 327 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF556Q9HAH1 456 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SLC25A19Q9HC21 320 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 HINT3Q9NQE9 182 aaKnown RBP10.6□□□□□ -0.71
SYNE2-214ENST00000554928 CYB5R1Q9UHQ9 305 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 COMMD3-BMI1R4GMX3 469 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 ACANP16112 2415 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 H7C1Q1 480 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 IFNGP01579 166 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ADRA2AP08913 450 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 FCGR1AP12314 374 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF3P17036 446 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 PCSK6P29122 969 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 SNRPD2P62316 118 aaKnown RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 HNRNPA0Q13151 305 aaKnown RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 TNK1Q13470 666 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 PTGES3Q15185 160 aaKnown RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 RAB35Q15286 201 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 CLEC12BQ2HXU8 276 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 RGS7BPQ6MZT1 257 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 PRSS57Q6UWY2 283 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 BCDIN3DQ7Z5W3 292 aaKnown RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ZDHHC13Q8IUH4 622 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 PARP8Q8N3A8 854 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF525Q8N782 197 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 OR10H5Q8NGA6 315 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 OR6K6Q8NGW6 343 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 ABHD4Q8TB40 342 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 OTULINQ96BN8 352 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 CIB1Q99828 191 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 VRK1Q99986 396 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 OR2J1Q9GZK6 312 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 OR51V1Q9H2C8 321 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 GSX1Q9H4S2 264 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-214ENST00000554928 S100A14Q9HCY8 104 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 KRT84Q9NSB2 600 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 TVP23BQ9NYZ1 205 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 DUSP13Q9UII6 198 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 SPEF1Q9Y4P9 236 aa10.59□□□□□ -0.71
SYNE2-214ENST00000554928 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 PRKYO43930 277 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 COX5BP10606 129 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 NAT2P11245 290 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 CD99P14209 185 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 ZNF250P15622 560 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 PPP1CBP62140 327 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 PPP2R2BQ00005 443 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 KRTAP27-1Q3LI81 207 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 NAA40Q86UY6 237 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 CPOQ8IVL8 374 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 ALDH16A1Q8IZ83 802 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-214ENST00000554928 ZMYND19Q96E35 227 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-214ENST00000554928 C4orf45Q96LM5 186 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 AMELYQ99218 206 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 NDRG4Q9ULP0 352 aaKnown RBP10.58□□□□□ -0.72
SYNE2-214ENST00000554928 STARD10Q9Y365 291 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 GRIP1Q9Y3R0 1128 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 PMF1-BGLAPU3KQ54 211 aa10.58□□□□□ -0.72
SYNE2-214ENST00000554928 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 A0A1W2PPW3 197 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 CCDC182A6NF36 153 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 ZAR1LA6NP61 321 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 ZNF593O00488 134 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SELENOFO60613 162 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 ICMTO60725 284 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 ABHD16AO95870 558 aa10.57□□□□□ -0.72
SYNE2-214ENST00000554928 SPARCP09486 303 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms