RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SFRP5Q5T4F7 317 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 OTPQ5XKR4 325 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 CFAP77Q6ZQR2 320 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 FJX1Q86VR8 437 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 CXorf67Q86X51 503 aaPredicted RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 RFLNBQ8N5W9 214 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF485Q8NCK3 441 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 STEAP2Q8NFT2 490 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 HTRA1Q92743 480 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 LRRC46Q96FV0 321 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 MAP6Q96JE9 813 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 OR5M11Q96RB7 305 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ATF6BQ99941 703 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 TTTY10Q9BZA0 68 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 PLEK2Q9NYT0 353 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 MRM2Q9UI43 246 aaKnown RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 RER1O15258 196 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 DOK2O60496 412 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 RAD51DO75771 328 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 INMTO95050 263 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 WNT11O96014 354 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 CD79AP11912 226 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 HSD11B1P28845 292 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 OPRL1P41146 370 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 TGM4P49221 684 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 PLP2Q04941 152 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF829Q3KNS6 432 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF474Q6S9Z5 364 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 BHLHA15Q7RTS1 189 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 SSX8Q7RTT4 187 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 KLBQ86Z14 1044 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 UFD1Q92890 307 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 SPTSSAQ969W0 71 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 PELI1Q96FA3 418 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 AMELYQ99218 206 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 COQ7Q99807 217 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ISG20L2Q9H9L3 353 aaKnown RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ACOXLQ9NUZ1 547 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 SLCO1C1Q9NYB5 712 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 JKAMPQ9P055 326 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ERRFI1Q9UJM3 462 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-206ENST00000554685 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 ATRXP46100 2492 aa12.57□□□□□ -0.4
SHOX2-206ENST00000554685 OR6C6A6NF89 314 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 ABHD16AO95870 558 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 COX5BP10606 129 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 CD53P19397 219 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 GNLYP22749 145 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 CD79BP40259 229 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 ASCL1P50553 236 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 GPR50Q13585 617 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 TPBGQ13641 420 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 RAB39AQ14964 217 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 CCDC92Q53HC0 331 aaPredicted RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 LIPNQ5VXI9 398 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 RPL22L1Q6P5R6 122 aaKnown RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 NCCRP1Q6ZVX7 275 aaPredicted RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 SPATC1Q76KD6 591 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF843Q8N446 348 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 RELL2Q8NC24 303 aaPredicted RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 OR13F1Q8NGS4 319 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 MOB1AQ9H8S9 216 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 PNRC2Q9NPJ4 139 aaKnown RBP12.56□□□□□ -0.4
SHOX2-206ENST00000554685 NDUFA13Q9P0J0 144 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 ZGRF1Q86YA3 2104 aa12.56□□□□□ -0.4
SHOX2-206ENST00000554685 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 IQCMA0A1B0GVH7 501 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 PSMD9O00233 223 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 CCRL2O00421 344 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 LRRTM2O43300 516 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 HLA-HP01893 362 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 CPEP16870 476 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 HTR5AP47898 357 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 RAB1AP62820 205 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 PSG4Q00888 419 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms