RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ANKRD46Q86W74 232 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 VRK2Q86Y07 508 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 PTOV1Q86YD1 416 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 C10orf107Q8IVU9 208 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 CLIP4Q8N3C7 705 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 GALNT4Q8N4A0 578 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 EIF1ADQ8N9N8 165 aaKnown RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 SCAIQ8N9R8 606 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 OR6S1Q8NH40 331 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 KLF14Q8TD94 323 aaPredicted RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 GEMIN6Q8WXD5 167 aaKnown RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 IFT81Q8WYA0 676 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM54Q969K7 222 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SLC35B4Q969S0 331 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TUBGCP3Q96CW5 907 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SLC41A3Q96GZ6 507 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 C3orf30Q96M34 536 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 MAGEB18Q96M61 343 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SH3GL3Q99963 347 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SLC35A5Q9BS91 424 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 KLK15Q9H2R5 256 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM165Q9HC07 324 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 DCAF16Q9NXF7 216 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 GLTPQ9NZD2 209 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 CALML5Q9NZT1 146 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 KIF17Q9P2E2 1029 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 RPS6KB2Q9UBS0 482 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TBK1Q9UHD2 729 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 IFT52Q9Y366 437 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF816-ZNF321PA0A0X1KG74 233 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 LOC100653049A0A140TA62 436 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 A0A1W2PPM1 405 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CCDC154A6NI56 674 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM233B4DJY2 109 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 H0YL77 283 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 H3BSA7 217 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 IFNL4K9M1U5 179 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 P2RY10O00398 339 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 PLPP3O14495 311 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SURF4O15260 269 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 KRT34O76011 436 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 KRT75O95678 551 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 LIPFP07098 398 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CHRNGP07510 517 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CBLP22681 906 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 STOMP27105 288 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 MPV17P39210 176 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 IER3P46695 156 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 GDI2P50395 445 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 BIDP55957 195 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 FGF12P61328 243 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 GNB2P62879 340 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 HSF2Q03933 536 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CKAP4Q07065 602 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 PUDPQ08623 228 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 MAPK11Q15759 364 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SMU1Q2TAY7 513 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 MTX3Q5HYI7 312 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SPATA46Q5T0L3 261 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF774Q6NX45 483 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 C8orf74Q6P047 294 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TRMT10CQ7L0Y3 403 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SERPINA11Q86U17 422 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 KLBQ86Z14 1044 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 LRRC34Q8IZ02 419 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 FITM2Q8N6M3 262 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 LSMEM1Q8N8F7 131 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 RBM15BQ8NDT2 890 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 OR4K5Q8NGD3 323 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 VANGL1Q8TAA9 524 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 DNAJA4Q8WW22 397 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 IPCEF1Q8WWN9 437 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 LRTOMTQ8WZ04 291 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CCDC115Q96NT0 180 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 SIGLEC11Q96RL6 698 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 FMO2Q99518 471 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 EPYCQ99645 322 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ARHGDIGQ99819 225 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 RHOXF2Q9BQY4 288 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ADI1Q9BV57 179 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TXLNGYQ9BZA5 131 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TRIM15Q9C019 465 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 OR2J1Q9GZK6 312 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 MAN2C1Q9NTJ4 1040 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ACOXLQ9NUZ1 547 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM140Q9NV12 185 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ASIC5Q9NY37 505 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms