RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZP1P60852 638 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 NAA20P61599 178 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RPS23P62266 143 aaKnown RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 MRPS25P82663 173 aaKnown RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 NPRL3Q12980 569 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PDE7AQ13946 482 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PCGF3Q3KNV8 242 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CDONQ4KMG0 1287 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 C6orf141Q5SZD1 244 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 GLDNQ6ZMI3 551 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 Q6ZSV7 163 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 SLC22A9Q8IVM8 553 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 NATD1Q8N6N6 113 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 KIR3DL3Q8N743 410 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM99Q8N816 258 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 NOA1Q8NC60 698 aaKnown RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 OR4F5Q8NH21 305 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PSMA8Q8TAA3 256 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 OR5P2Q8WZ92 322 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RAB1CQ92928 201 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RAB8BQ92930 207 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 OTULINQ96BN8 352 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 MOAP1Q96BY2 351 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 DNAJA3Q96EY1 480 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 C1orf147Q96MC9 270 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TMEM237Q96Q45 408 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CCT7Q99832 543 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CITED1Q99966 193 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RBM4BQ9BQ04 359 aaKnown RBP4.09□□□□□ -1.75
ATXN3-228ENST00000554592 FAM110AQ9BQ89 295 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 LINC00470Q9BZP3 86 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 RAB17Q9H0T7 212 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 NOX3Q9HBY0 568 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 MID1IP1Q9NPA3 183 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 C1orf109Q9NX04 203 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 ZDHHC2Q9UIJ5 367 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 SLC35A3Q9Y2D2 325 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 TMED7Q9Y3B3 224 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 CCL27Q9Y4X3 112 aa4.09□□□□□ -1.75
ATXN3-228ENST00000554592 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 A0A1W2PQ09 198 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM72A0PK05 275 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 POLR3GO15318 223 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 SHOX2O60902 331 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 FOXH1O75593 365 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF432O94892 652 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 AKR7A3O95154 331 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 LCATP04180 440 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 CRYBA1P05813 215 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 GUSBP08236 651 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 GSTA1P08263 222 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 BCKDHAP12694 445 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF35P13682 527 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 EFNA1P20827 205 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 OMGP23515 440 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 CHATP28329 748 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 RPL3P39023 403 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 CAPZA2P47755 286 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 IDH2P48735 452 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 POLR2HP52434 150 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 FOXA1P55317 472 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 VSNL1P62760 191 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 GALK2Q01415 458 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ROR2Q01974 943 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 EPS8Q12929 822 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 CEACAM7Q14002 265 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MAD2L1BPQ15013 274 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MAPK14Q16539 360 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TAF9Q16594 264 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MOGQ16653 247 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TRMT5Q32P41 509 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ARHGAP11BQ3KRB8 267 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ARMCX4Q5H9R4 360 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ARFGEF3Q5TH69 2177 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 PRAMEF8Q5VWM4 474 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 PRAMEF7Q5VXH5 474 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 OLFML2AQ68BL7 652 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ASPHD2Q6ICH7 369 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MDP1Q86V88 176 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 LRP11Q86VZ4 500 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 WDFY1Q8IWB7 410 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 IFT20Q8IY31 132 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 MREGQ8N565 214 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ARFGAP2Q8N6H7 521 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms